RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 ABHD5Q8WTS1 349 aa14.03□□□□□ -0.16
HNRNPU-228ENST00000640306 ZNF703Q9H7S9 590 aaPredicted RBP14.03□□□□□ -0.16
HNRNPU-228ENST00000640306 A0A087WWC5 75 aa14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 A0A1B0GU03 582 aa14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 CD55P08174 381 aa14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 TRA2AQ13595 282 aaKnown RBP eCLIP14.02□□□□□ -0.167e-10■■□□□ 14.3
HNRNPU-228ENST00000640306 C6orf15Q6UXA7 325 aaPredicted RBP14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 SLC35E3Q7Z769 313 aa14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 ZNF525Q8N782 197 aa14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 TMEM45BQ96B21 275 aa14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 RHOVQ96L33 236 aa14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 RAB40CQ96S21 281 aa14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 TNRC6BQ9UPQ9 1833 aaKnown RBP14.02□□□□□ -0.16
HNRNPU-228ENST00000640306 PPP1R2P9O14990 202 aa14.02□□□□□ -0.17
HNRNPU-228ENST00000640306 DEFA4P12838 97 aa14.02□□□□□ -0.17
HNRNPU-228ENST00000640306 GNG3P63215 75 aa14.02□□□□□ -0.17
HNRNPU-228ENST00000640306 TESK1Q15569 626 aa14.02□□□□□ -0.17
HNRNPU-228ENST00000640306 WDR25Q64LD2 544 aaPredicted RBP14.02□□□□□ -0.17
HNRNPU-228ENST00000640306 SAXO1Q8IYX7 474 aa14.02□□□□□ -0.17
HNRNPU-228ENST00000640306 SNX22Q96L94 193 aa14.02□□□□□ -0.17
HNRNPU-228ENST00000640306 OR4C12Q96R67 309 aa14.02□□□□□ -0.17
HNRNPU-228ENST00000640306 RBKSQ9H477 322 aa14.02□□□□□ -0.17
HNRNPU-228ENST00000640306 MT-CO3P00414 261 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 TFF1P04155 84 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 PGA5P0DJD9 388 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 TUBG1P23258 451 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 DUSP3P51452 185 aaPredicted RBP14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 PLGLB1Q02325 96 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 ARRDC1-AS1Q9H2J1 176 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 APLNRP35414 380 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 ERVS71-1P61550 626 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 ZNF585BQ52M93 769 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 ZNF573Q86YE8 665 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 IGKV3D-15A0A087WSY6 115 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 CLDN1O95832 211 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 CEACAM6P40199 344 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 OR8G1Q15617 311 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 ADIRFQ15847 76 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 SPINK9Q5DT21 86 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 ABHD17BQ5VST6 288 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 MCEMP1Q8IX19 187 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 ZNF808Q8N4W9 903 aaPredicted RBP14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 IL22RA2Q969J5 263 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 TTTY12Q9BZ98 90 aa14.01□□□□□ -0.17
HNRNPU-228ENST00000640306 KRASP01116 189 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 MDH2P40926 338 aaKnown RBP14□□□□□ -0.17
HNRNPU-228ENST00000640306 SSPNQ14714 243 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 ALKBH6Q3KRA9 238 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 PNPLA5Q7Z6Z6 429 aaPredicted RBP14□□□□□ -0.17
HNRNPU-228ENST00000640306 CXorf67Q86X51 503 aaPredicted RBP14□□□□□ -0.17
HNRNPU-228ENST00000640306 LINC00469Q8N7U9 141 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 CA5BP1Q8WTZ4 195 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 RPUSD4Q96CM3 377 aaKnown RBP14□□□□□ -0.17
HNRNPU-228ENST00000640306 CFAP47Q6ZTR5 3102 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 MAP1LC3B2A6NCE7 125 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 CDIPTO14735 213 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 OR2H2O95918 312 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 CELA3BP08861 270 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 SP9P0CG40 484 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 CLN3Q13286 438 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 OR1C1Q15619 314 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 SRSF7Q16629 238 aaKnown RBP eCLIP14□□□□□ -0.177e-20■□□□□ 8.9
HNRNPU-228ENST00000640306 C1orf87Q8N0U7 546 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 S100PBPQ96BU1 408 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 FAM173AQ9BQD7 235 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 MAP1LC3BQ9GZQ8 125 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 SLC25A22Q9H936 323 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 SIRT7Q9NRC8 400 aa14□□□□□ -0.17
HNRNPU-228ENST00000640306 RAMP3O60896 148 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 IGKV1D-33P01593 117 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 IGKV1-33P01594 117 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 ZNF816Q0VGE8 651 aaPredicted RBP13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 TMEM251Q8N6I4 163 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 GATAD1Q8WUU5 269 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 CABLES2Q9BTV7 478 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 PRO1933Q9H354 126 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 RIMS4Q9H426 269 aaPredicted RBP13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 CLDN34H7C241 214 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 GRPP07492 148 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 BMP5P22003 454 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 LINC00205P59089 165 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 PEAR1Q5VY43 1037 aaPredicted RBP13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 WDR86Q86TI4 376 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 HIST3H2BBQ8N257 126 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 OR5T1Q8NG75 326 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 LHX4Q969G2 390 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 LINC00470Q9BZP3 86 aa13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 CISD1Q9NZ45 108 aaKnown RBP13.99□□□□□ -0.17
HNRNPU-228ENST00000640306 IGHEP01854 428 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 MDP1Q86V88 176 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 DRAM1Q8N682 238 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 DMRT1Q9Y5R6 373 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 CXorf65A6NEN9 183 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 G6PCP35575 357 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 MPLP40238 635 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 RTP5Q14D33 572 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 Q6P435 159 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 FGFRL1Q8N441 504 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 OR51I2Q9H344 312 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 SLC39A9Q9NUM3 307 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms