RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 RND1Q92730 232 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 OPN3Q9H1Y3 402 aaPredicted RBP12.42□□□□□ -0.42
SCARB2-216ENST00000639300 GAL3ST2Q9H3Q3 398 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 FOXJ2Q9P0K8 574 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 TRAV20A0A0B4J274 112 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 NCBP2LA6PVI3 153 aaKnown RBP12.41□□□□□ -0.42
SCARB2-216ENST00000639300 HBZP02008 142 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 RBP4P02753 201 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 CTRB1P17538 263 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 RAB5AP20339 215 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 ATRXP46100 2492 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 COL10A1Q03692 680 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 CTRB2Q6GPI1 263 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 IMMP1LQ96LU5 166 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 SAP30LQ9HAJ7 183 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 ZNF319Q9P2F9 582 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 ONECUT1Q9UBC0 465 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 RNF7Q9UBF6 113 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 USF3Q68DE3 2245 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 C11orf94C9JXX5 98 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 CLDN14O95500 239 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 KRTDAPP60985 99 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 CYB561D1Q8N8Q1 229 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 RSPO3Q9BXY4 272 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-216ENST00000639300 ZNF552Q9H707 407 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-216ENST00000639300 FAM157AC9JC47 383 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 PPIHO43447 177 aaKnown RBP12.41□□□□□ -0.42
SCARB2-216ENST00000639300 ORM2P19652 201 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 MDKP21741 143 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-216ENST00000639300 S100A7P31151 101 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 SMIM15Q7Z3B0 74 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 AQP10Q96PS8 301 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 MRPL13Q9BYD1 178 aaKnown RBP12.41□□□□□ -0.42
SCARB2-216ENST00000639300 ZNF586Q9NXT0 402 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 VAX2Q9UIW0 290 aa12.41□□□□□ -0.42
SCARB2-216ENST00000639300 FTH1P19P0C7X4 201 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 MRPL14Q6P1L8 145 aaKnown RBP12.4□□□□□ -0.42
SCARB2-216ENST00000639300 CALHM1Q8IU99 346 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 NAT8BQ9UHF3 227 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 AP4M1O00189 453 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 PGLYRP1O75594 196 aaPredicted RBP12.4□□□□□ -0.42
SCARB2-216ENST00000639300 SNRPCP09234 159 aaKnown RBP12.4□□□□□ -0.42
SCARB2-216ENST00000639300 APELAP0DMC3 54 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 ZNF708P17019 499 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 REG1BP48304 166 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 STPG1Q5TH74 334 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 ASPHD2Q6ICH7 369 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 BLNKQ8WV28 456 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 DDA1Q9BW61 102 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 TRAV38-1A0A0B4J264 116 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 ABHD14AQ9BUJ0 271 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 SH2D2AQ9NP31 389 aa12.4□□□□□ -0.42
SCARB2-216ENST00000639300 ZFHX2Q9C0A1 2572 aaPredicted RBP12.4□□□□□ -0.42
SCARB2-216ENST00000639300 MEOX2P50222 304 aa12.4□□□□□ -0.43
SCARB2-216ENST00000639300 PRO1933Q9H354 126 aa12.4□□□□□ -0.43
SCARB2-216ENST00000639300 TMPRSS5Q9H3S3 457 aa12.4□□□□□ -0.43
SCARB2-216ENST00000639300 SLC45A2Q9UMX9 530 aa12.4□□□□□ -0.43
SCARB2-216ENST00000639300 WIPI2Q9Y4P8 454 aa12.4□□□□□ -0.43
SCARB2-216ENST00000639300 IGLV3-12A0A075B6K2 115 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 HSBP1O75506 76 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 SLC35E3Q7Z769 313 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 OR4P4Q8NGL7 312 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 TMEM54Q969K7 222 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 GPR146Q96CH1 333 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 SNX22Q96L94 193 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 ZNF665Q9H7R5 613 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 DOCK10Q96BY6 2186 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 UMODP07911 640 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 MELTFP08582 738 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 OR2T10Q8NGZ9 312 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 CA5BP1Q8WTZ4 195 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 FANCMQ8IYD8 2048 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 FNDC1Q4ZHG4 1894 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-216ENST00000639300 XKRY2A2RUG3 117 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 CD8AP01732 235 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 IGFBP3P17936 291 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-216ENST00000639300 PNRC1Q12796 327 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-216ENST00000639300 AARDQ4LEZ3 155 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 MRGPRGQ86SM5 289 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 PRDM14Q9GZV8 571 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 COL4A6Q14031 1691 aa12.39□□□□□ -0.43
SCARB2-216ENST00000639300 SERTM2A0A1B0GWG4 89 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 EFNA2O43921 213 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 TCL1AP56279 114 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 HIST1H3AP68431 136 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 MYPOPQ86VE0 399 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-216ENST00000639300 FGFRL1Q8N441 504 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 MRPL30Q8TCC3 161 aaKnown RBP12.38□□□□□ -0.43
SCARB2-216ENST00000639300 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 SH3BGRL3Q9H299 93 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 PMCHP20382 165 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 GNG4P50150 75 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 NSUN5P2Q63ZY6 315 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 TIMP4Q99727 224 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 TMEM204Q9BSN7 226 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 NAT8Q9UHE5 227 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 MYLKQ15746 1914 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 ZSWIM8A7E2V4 1837 aa12.38□□□□□ -0.43
SCARB2-216ENST00000639300 TMEM210A6NLX4 147 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms