RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 DEFB108AA8MXU0 73 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 NUTF2P61970 127 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 RNF122Q9H9V4 155 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 TRBV7-9A0A0J9YWB2 115 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 KBTBD11-OT1A0A1B0GTJ5 212 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 CA1P00915 261 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 PARLQ9H300 379 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 IGKV6-21A0A0C4DH24 114 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 KIAA1549Q9HCM3 1950 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 A0A1B0GWB2 263 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 ZNF83P51522 516 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 GUCA2AQ02747 115 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 TMEM95Q3KNT9 176 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 TEX37Q96LM6 180 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 PYCR3Q53H96 274 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 RCC2Q9P258 522 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 IGHV3-15A0A0B4J1V0 119 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 NKX2-8O15522 239 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 ZNF137PP52743 207 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 NUDT8Q8WV74 236 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 SSBP4Q9BWG4 385 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 HMGA2P52926 109 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 TNFSF18Q9UNG2 199 aa17.05■□□□□ 0.32
CACNA1A-257ENST00000638009 GFYI3L273 518 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 NPFFO15130 113 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 FZD5Q13467 585 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 GLCCI1Q86VQ1 547 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 B4GALNT1Q00973 533 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 PLEKHB1Q9UF11 243 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 SBF2Q86WG5 1849 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 ZFPL1O95159 310 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 POLR2GP62487 172 aaKnown RBP eCLIP17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 KLF9Q13886 244 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 FOXC2Q99958 501 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 LRRC29Q8WV35 223 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 GAPDHP04406 335 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 PRR14Q9BWN1 585 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 ANKRD20A5PA0PJZ0 165 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 UPK1AO00322 258 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 WNT5AP41221 380 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 LRTM2Q8N967 370 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 OR10S1Q8NGN2 331 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 J3QR06 171 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 LHX8Q68G74 356 aa17.04■□□□□ 0.32
CACNA1A-257ENST00000638009 PPYP01298 95 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 ETFBKMTQ8IXQ9 262 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 TP53I13Q8NBR0 393 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 RAX2Q96IS3 184 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 S100A7L2Q5SY68 101 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 WTIPA6NIX2 430 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 CXCL13O43927 109 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 PAGE4O60829 102 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 K7N7A8 449 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 WNT1P04628 370 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 MRGPRDQ8TDS7 321 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 GPR82Q96P67 336 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 OR51B2Q9Y5P1 312 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 GLULP15104 373 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 COX7A1P24310 79 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 TMEM249Q2WGJ8 235 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 CXorf67Q86X51 503 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 OR13H1Q8NG92 308 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 ABHD1Q96SE0 405 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 CD3EP07766 207 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 SRSF4Q08170 494 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 MAVSQ7Z434 540 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 CBLN2Q8IUK8 224 aa17.03■□□□□ 0.32
CACNA1A-257ENST00000638009 SRSF6Q13247 344 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 PCDH15Q96QU1 1955 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 DSPPQ9NZW4 1301 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 LINC01553A4QN01 128 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 GALNSP34059 522 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 CRYBB2P43320 205 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 C1orf220Q5T0J3 134 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 ZNF714Q96N38 554 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 MRPL18Q9H0U6 180 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 TRAV30A0A087WSZ9 112 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 FCMRO60667 390 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 LSM6P62312 80 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 RLN3Q8WXF3 142 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 ELSPBP1Q96BH3 223 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 TRAV8-2A0A0B4J237 113 aa17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 HSPB1P04792 205 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-257ENST00000638009 C7orf71A4D174 169 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 ZNF688P0C7X2 276 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 FAM106CPP0CH98 169 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 SPINK9Q5DT21 86 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 CYB561D1Q8N8Q1 229 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 COL16A1Q07092 1604 aaPredicted RBP17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 LTB4R2Q9NPC1 389 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 TREM2Q9NZC2 230 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 C10orf111Q8N326 155 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 OR11G2Q8NGC1 345 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 ORAI1Q96D31 301 aa17.02■□□□□ 0.31
CACNA1A-257ENST00000638009 FAM27D1Q5T7N8 215 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 OR1K1Q8NGR3 316 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 FAM157AC9JC47 383 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 MESTQ5EB52 335 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 ZFAND6Q6FIF0 208 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms