RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 OR8U1Q8NH10 309 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 GALMQ96C23 342 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 YPEL2Q96QA6 119 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 TMEM59Q9BXS4 323 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 ZNF107Q9UII5 783 aaPredicted RBP15.73■□□□□ 0.11
CLN6-222ENST00000637667 LSM2Q9Y333 95 aaKnown RBP15.73■□□□□ 0.11
CLN6-222ENST00000637667 LRRC42Q9Y546 428 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 MYF6P23409 242 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 ACTBP60709 375 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 SPHARQ15513 63 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 HMGN3Q15651 99 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 LY6G6FQ5SQ64 297 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 C6orf201Q7Z4U5 140 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 KCNG3Q8TAE7 436 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 KCTD7Q96MP8 289 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 NABP2Q9BQ15 211 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 FAAP24Q9BTP7 215 aa15.72■□□□□ 0.11
CLN6-222ENST00000637667 OR5H8P0DN80 308 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 SRMP19623 302 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 HTR2CP28335 458 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 OR3A3P47888 321 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 HSD17B12Q53GQ0 312 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 VAX1Q5SQQ9 334 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 ZNF833PQ6ZTB9 187 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 CEACAM19Q7Z692 300 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 OR2AK2Q8NG84 335 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 TM2D1Q9BX74 207 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 KCNK15Q9H427 330 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 ABRACLQ9P1F3 81 aa15.71■□□□□ 0.11
CLN6-222ENST00000637667 ZMAT5Q9UDW3 170 aaKnown RBP15.71■□□□□ 0.11
CLN6-222ENST00000637667 SLC22A1O15245 554 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 PSMB8P28062 276 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 DGCR2P98153 550 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 UNC119Q13432 240 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 SVOPQ8N4V2 548 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 OR5M8Q8NGP6 311 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 C4orf3Q8WVX3 66 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 RITA1Q96K30 269 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 ZNF251Q9BRH9 671 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 CHCHD6Q9BRQ6 235 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 NICN1Q9BSH3 213 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 SCN3BQ9NY72 215 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 DNAH9Q9NYC9 4486 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 COL7A1Q02388 2944 aa15.7■□□□□ 0.1
CLN6-222ENST00000637667 SAA2-SAA4A0A096LPE2 208 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 TMEM14DPA8MWL7 114 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 NAPSAO96009 420 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 UCHL1P09936 223 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 SAA2P0DJI9 122 aaPredicted RBP15.69■□□□□ 0.1
CLN6-222ENST00000637667 CD37P11049 281 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 CNTFRP26992 372 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 QRFPP83859 136 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 DCTN2Q13561 401 aaKnown RBP15.69■□□□□ 0.1
CLN6-222ENST00000637667 MED22Q15528 200 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 C11orf87Q6NUJ2 197 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 IL1F10Q8WWZ1 152 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 IFI27L2Q9H2X8 130 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 CHMP1AQ9HD42 196 aaPredicted RBP15.69■□□□□ 0.1
CLN6-222ENST00000637667 STEAP1Q9UHE8 339 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 WSB1Q9Y6I7 421 aa15.69■□□□□ 0.1
CLN6-222ENST00000637667 TENM3Q9P273 2699 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 ANKRD65E5RJM6 399 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 NBR2O15453 112 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 BPNT1O95861 308 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 HLA-DRB1P01911 266 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 BLVRBP30043 206 aaPredicted RBP15.68■□□□□ 0.1
CLN6-222ENST00000637667 LUMP51884 338 aaPredicted RBP15.68■□□□□ 0.1
CLN6-222ENST00000637667 CD69Q07108 199 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 IRF3Q14653 427 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 C5orf64Q2M2E5 130 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 LIPKQ5VXJ0 399 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 ZNF880Q6PDB4 577 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 MOB1BQ7L9L4 216 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 OR6M1Q8NGM8 313 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 MYOZ3Q8TDC0 251 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 UFD1Q92890 307 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 B9D2Q9BPU9 175 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 ANKRD60Q9BZ19 345 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 OR51J1Q9H342 316 aa15.68■□□□□ 0.1
CLN6-222ENST00000637667 A0A0A6YYD4 124 aa15.67■□□□□ 0.1
CLN6-222ENST00000637667 IGHV7-81A0A0B4J1V7 117 aa15.67■□□□□ 0.1
CLN6-222ENST00000637667 ATP6V0E1O15342 81 aa15.67■□□□□ 0.1
CLN6-222ENST00000637667 ST8SIA5O15466 376 aa15.67■□□□□ 0.1
CLN6-222ENST00000637667 PPIFP30405 207 aaKnown RBP15.67■□□□□ 0.1
CLN6-222ENST00000637667 FAM71F2Q6NXP2 309 aa15.67■□□□□ 0.1
CLN6-222ENST00000637667 SETD6Q8TBK2 473 aa15.67■□□□□ 0.1
CLN6-222ENST00000637667 TMEM203Q969S6 136 aa15.67■□□□□ 0.1
CLN6-222ENST00000637667 PARP11Q9NR21 331 aa15.67■□□□□ 0.1
CLN6-222ENST00000637667 PLEKHJ1Q9NW61 149 aa15.67■□□□□ 0.1
CLN6-222ENST00000637667 NKX1-2Q9UD57 310 aaPredicted RBP15.67■□□□□ 0.1
CLN6-222ENST00000637667 G3V318 75 aa15.66■□□□□ 0.1
CLN6-222ENST00000637667 RAMP3O60896 148 aa15.66■□□□□ 0.1
CLN6-222ENST00000637667 FHL3Q13643 280 aa15.66■□□□□ 0.1
CLN6-222ENST00000637667 P2RY14Q15391 338 aa15.66■□□□□ 0.1
CLN6-222ENST00000637667 C9orf66Q5T8R8 295 aa15.66■□□□□ 0.1
CLN6-222ENST00000637667 LIN54Q6MZP7 749 aa15.66■□□□□ 0.1
CLN6-222ENST00000637667 TMEM65Q6PI78 240 aa15.66■□□□□ 0.1
CLN6-222ENST00000637667 NPBQ8NG41 125 aa15.66■□□□□ 0.1
CLN6-222ENST00000637667 PARP12Q9H0J9 701 aaKnown RBP15.66■□□□□ 0.1
CLN6-222ENST00000637667 LPAR5Q9H1C0 372 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms