RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 DGCR2P98153 550 aa12.98□□□□□ -0.33
CLN6-216ENST00000636876 RNASE12Q5GAN4 147 aaKnown RBP12.98□□□□□ -0.33
CLN6-216ENST00000636876 CT45A1Q5HYN5 189 aa12.98□□□□□ -0.33
CLN6-216ENST00000636876 LDLRAD2Q5SZI1 272 aa12.98□□□□□ -0.33
CLN6-216ENST00000636876 SLC25A48Q6ZT89 311 aaKnown RBP12.98□□□□□ -0.33
CLN6-216ENST00000636876 LHFPL4Q7Z7J7 247 aa12.98□□□□□ -0.33
CLN6-216ENST00000636876 CT45A3Q8NHU0 189 aa12.98□□□□□ -0.33
CLN6-216ENST00000636876 C17orf50Q8WW18 174 aa12.98□□□□□ -0.33
CLN6-216ENST00000636876 SLC6A7Q99884 636 aa12.98□□□□□ -0.33
CLN6-216ENST00000636876 PARP12Q9H0J9 701 aaKnown RBP12.98□□□□□ -0.33
CLN6-216ENST00000636876 V9GYH0 126 aa12.98□□□□□ -0.33
CLN6-216ENST00000636876 SLC31A2O15432 143 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 CEACAM6P40199 344 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 ETV6P41212 452 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 ARPC4P59998 168 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 DEFB112Q30KQ8 113 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 SPANXN2Q5MJ10 180 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 OR10X1Q8NGY0 326 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 OR10J5Q8NHC4 309 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 SMIM4Q8WVI0 70 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 FCAMRQ8WWV6 532 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 TOLLIPQ9H0E2 274 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 DPM3Q9P2X0 92 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 MTFP1Q9UDX5 166 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 FAM96BQ9Y3D0 163 aa12.97□□□□□ -0.33
CLN6-216ENST00000636876 AMMECR1Q9Y4X0 333 aaPredicted RBP12.97□□□□□ -0.33
CLN6-216ENST00000636876 MDFIC2A0A1B0GVS7 189 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 BUB1B-PAK6H3BSN5 160 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 ITGB1BP1O14713 200 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 GSTZ1O43708 216 aaPredicted RBP12.96□□□□□ -0.33
CLN6-216ENST00000636876 FBP1P09467 338 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 PTBP1P26599 531 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLN6-216ENST00000636876 ZNF134P52741 427 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 ACTBP60709 375 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 ACTG1P63261 375 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 OR2AK2Q8NG84 335 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 OR5AP2Q8NGF4 316 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 EDARADDQ8WWZ3 215 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 CREB3L1Q96BA8 519 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 MALSU1Q96EH3 234 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 ZNF48Q96MX3 618 aaPredicted RBP12.96□□□□□ -0.33
CLN6-216ENST00000636876 GINS4Q9BRT9 223 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 ABHD14AQ9BUJ0 271 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 PRDM13Q9H4Q3 707 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 RDH8Q9NYR8 311 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 KLK11Q9UBX7 282 aa12.96□□□□□ -0.33
CLN6-216ENST00000636876 LEUTXA8MZ59 168 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 LY6LH3BQJ8 138 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 RBBP9O75884 186 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 CEACAM3P40198 252 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 TAS2R46P59540 309 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 CDK10Q15131 360 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 ZNF79Q15937 498 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 LINC00299Q6ZSB3 139 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 LYSMD2Q8IV50 215 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 H1FOOQ8IZA3 346 aaPredicted RBP12.95□□□□□ -0.34
CLN6-216ENST00000636876 SIGLECL1Q8N7X8 197 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 C11orf54Q9H0W9 315 aaPredicted RBP12.95□□□□□ -0.34
CLN6-216ENST00000636876 NECAP2Q9NVZ3 263 aa12.95□□□□□ -0.34
CLN6-216ENST00000636876 FBN3Q75N90 2809 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 IL3RAP26951 378 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 OR3A3P47888 321 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 RAB7AP51149 207 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 ZNF137PP52743 207 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 SSBP1Q04837 148 aaKnown RBP12.94□□□□□ -0.34
CLN6-216ENST00000636876 PYDC2Q56P42 97 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 TPTE2P1Q5T6R2 138 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 PRIMA1Q86XR5 153 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 DYNAPQ8N1N2 210 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 OR5H2Q8NGV7 314 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 ZNF418Q8TF45 676 aaPredicted RBP12.94□□□□□ -0.34
CLN6-216ENST00000636876 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 MEGF9Q9H1U4 602 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 OCEL1Q9H607 264 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 RBMX2Q9Y388 322 aaKnown RBP12.94□□□□□ -0.34
CLN6-216ENST00000636876 HILPDAQ9Y5L2 63 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 COL6A5A8TX70 2615 aa12.94□□□□□ -0.34
CLN6-216ENST00000636876 ATRQ13535 2644 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 OOSP1A8MZH6 123 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 PMP2P02689 132 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 OR5H8P0DN80 308 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 NFYAP23511 347 aaPredicted RBP12.93□□□□□ -0.34
CLN6-216ENST00000636876 PAX6P26367 422 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 HLA-DMAP28067 261 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 HRH1P35367 487 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 SSX2Q16385 188 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 LDLRAD3Q86YD5 345 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 LYG1Q8N1E2 194 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 TOMM40LQ969M1 308 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 ST6GALNAC6Q969X2 333 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 RPEQ96AT9 228 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 IFI27L2Q9H2X8 130 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 EHFQ9NZC4 300 aa12.93□□□□□ -0.34
CLN6-216ENST00000636876 ZNF736B4DX44 427 aaPredicted RBP12.92□□□□□ -0.34
CLN6-216ENST00000636876 TUSC2O75896 110 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 RFX2P48378 723 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 DYRK1AQ13627 763 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 ACTBL2Q562R1 376 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 RBMS3Q6XE24 437 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms