RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TDHQ8IZJ6 230 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 TMEM229BQ8NBD8 167 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 OR4X2Q8NGF9 303 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 ISL2Q96A47 359 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 C4orf45Q96LM5 186 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 SORT1Q99523 831 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 VAX2Q9UIW0 290 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 A0A0G2JLM5 398 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 DEFB108AA8MXU0 73 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 UCP3P55916 312 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 GLIPR2Q9H4G4 154 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 ERRFI1Q9UJM3 462 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-212ENST00000636194 MPC1Q9Y5U8 109 aa5.32□□□□□ -1.56
SCN1A-212ENST00000636194 C7orf71A4D174 169 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 RBFOX3A6NFN3 312 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 CA6P23280 308 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 PSG6Q00889 435 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 PQLC3Q8N755 202 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 SLC37A2Q8TED4 501 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 TMEM106BQ9NUM4 274 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 METTL1Q9UBP6 276 aaKnown RBP5.31□□□□□ -1.56
SCN1A-212ENST00000636194 SLC25A10Q9UBX3 287 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-212ENST00000636194 ANAPC10Q9UM13 185 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 CAPZBP47756 277 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 HBBP68871 147 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 GGTLC2Q14390 218 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 TMEM42Q69YG0 159 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 Q96M85 177 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 GGTLC1Q9BX51 225 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 SEPSECSQ9HD40 501 aaKnown RBP5.31□□□□□ -1.56
SCN1A-212ENST00000636194 PSORS1C1Q9UIG5 152 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 LNP1A1A4G5 178 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 DPM2O94777 84 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 COL9A2Q14055 689 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-212ENST00000636194 AANATQ16613 207 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 SLC16A13Q7RTY0 426 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 OR52I2Q8NH67 350 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 SLC25A38Q96DW6 304 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 TMSB15BA0A087X1C1 80 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 FGF17O60258 216 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 C1SP09871 688 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 CEACAM16Q2WEN9 425 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 C11orf87Q6NUJ2 197 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-212ENST00000636194 FAM57AQ8TBR7 257 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 TXNDC17Q9BRA2 123 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 MS4A8Q9BY19 250 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 PEMTQ9UBM1 199 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 DAPP1Q9UN19 280 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 GPR45Q9Y5Y3 372 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 TRGV2A0A075B6R0 118 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 TRAV1-2A0A0B4J238 106 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 CCL21O00585 134 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 OGG1O15527 345 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 NDUFA2O43678 99 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 ICOSLGO75144 302 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 HLA-DRB1P01911 266 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 HOXA5P20719 270 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 ANOS1P23352 680 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 RPL18Q07020 188 aaKnown RBP5.31□□□□□ -1.56
SCN1A-212ENST00000636194 NRN1LQ496H8 165 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 FHL5Q5TD97 284 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 METRNLQ641Q3 311 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 ZNF774Q6NX45 483 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 SYS1Q8N2H4 156 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 LRRC75AQ8NAA5 344 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 AUNIPQ9H7T9 357 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 SLC25A19Q9HC21 320 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 UQCR10Q9UDW1 63 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 DSCAML1Q8TD84 2053 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 CGB1A6NKQ9 187 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 OR11H12B2RN74 326 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 ALG1L2C9J202 215 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 INS-IGF2F8WCM5 200 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 M0QZQ0 153 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 INSP01308 110 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 CTLA4P16410 223 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 GPX2P18283 190 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 ZNF137PP52743 207 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 OR11H1Q8NG94 326 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 OR11H2Q8NH07 326 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 EEF1AKMT3Q96AZ1 226 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 TEX101Q9BY14 249 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 HCFC1R1Q9NWW0 138 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
SCN1A-212ENST00000636194 TRAV8-4A0A0B4J246 113 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 MPTX1A8MV57 137 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 LEUTXA8MZ59 168 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 GFYI3L273 518 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 SYNGR1O43759 233 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 CX3CL1P78423 397 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 ZNF740Q8NDX6 193 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 OR4D11Q8NGI4 311 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 GPR179Q6PRD1 2367 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 FOLR2P14207 255 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 HDHD3Q9BSH5 251 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-212ENST00000636194 KLK15Q9H2R5 256 aa5.3□□□□□ -1.56
SCN1A-212ENST00000636194 ISG20L2Q9H9L3 353 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms