RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 RAB30Q15771 203 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 IZUMO4Q1ZYL8 232 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 SPAG17Q6Q759 2223 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 MYO9BQ13459 2157 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 IGHV1-45A0A0A0MS14 117 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 UBE2L5PA0A1B0GUS4 154 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 SRD5A2P31213 254 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 CNN1P51911 297 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 ZNF468Q5VIY5 522 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 GBGT1Q8N5D6 347 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 OR5A2Q8NGI9 324 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 IMMP1LQ96LU5 166 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 HS3ST6Q96QI5 342 aa12.59□□□□□ -0.39
CACNA1A-220ENST00000635988 G3V3Y1 287 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 EREGO14944 169 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 IGKV1-5P01602 117 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 GYPAP02724 150 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 EN2P19622 333 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 B3GALT5-AS1P59052 145 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 MRPL21Q7Z2W9 205 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 OR4F5Q8NH21 305 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 OR4F4Q96R69 305 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 WNT16Q9UBV4 365 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 CELA2AP08217 269 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 TESK1Q15569 626 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 C1orf194Q5T5A4 169 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 TMEM14EPQ6UXP3 125 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 CPEB3Q8NE35 698 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 NEIL1Q96FI4 390 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 IMMP2LQ96T52 175 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 ELOVL1Q9BW60 279 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 FGF23Q9GZV9 251 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 FKBP11Q9NYL4 201 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 IL36RNQ9UBH0 155 aa12.58□□□□□ -0.4
CACNA1A-220ENST00000635988 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 IGKV1D-33P01593 117 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 IGKV1-33P01594 117 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 CD99P14209 185 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 RAB4AP20338 218 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 C20orf204Q6ZNR8 217 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 GGNQ86UU5 652 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 EML6Q6ZMW3 1958 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 KIAA1549Q9HCM3 1950 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 IGHV5-10-1A0A0J9YXX1 117 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 CXCL13O43927 109 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 MOB1BQ7L9L4 216 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 MRPL52Q86TS9 123 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 TMEM147Q9BVK8 224 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 SNHG12Q9BXW3 62 aa12.57□□□□□ -0.4
CACNA1A-220ENST00000635988 RNF212BA8MTL3 300 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 M0QZK8 103 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 OR4A8P0C604 315 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 COX5AP20674 150 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 RTP5Q14D33 572 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 RPS19BP1Q86WX3 136 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 OR10G9Q8NGN4 311 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 OR10G7Q8NGN6 311 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 COX6A1P12074 109 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 OR10J1P30954 320 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 CASP6P55212 293 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 ZNF585BQ52M93 769 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 ACSM6Q6P461 480 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 YRDCQ86U90 279 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 IL1F10Q8WWZ1 152 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 RDH5Q92781 318 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 APOBEC3DQ96AK3 386 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 R3HDM4Q96D70 268 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 SGCZQ96LD1 299 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 SLC25A22Q9H936 323 aa12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 RBM7Q9Y580 266 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-220ENST00000635988 KIR2DL5BA0A0G2JN68 375 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 KIR2DL5BA0A0G2JPC4 375 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 TMEM210A6NLX4 147 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 HS3ST1O14792 307 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 CLDN1O95832 211 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 IGLV2-14P01704 120 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 COX5BP10606 129 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 OR8G2PQ6IF36 304 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 ZNF573Q86YE8 665 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 KIR2DL5AQ8N109 375 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 CCDC74BQ96LY2 380 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 AKIRIN1Q9H9L7 192 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 TRAV24A0A0B4J272 114 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 A0A1W2PQM1 296 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 SYNGR1O43759 233 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 MLF1P58340 268 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 CCL7P80098 99 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 MSMO1Q15800 293 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 CLEC12BQ2HXU8 276 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 OR10D3Q8NH80 312 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 TMEM45BQ96B21 275 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 DLL3Q9NYJ7 618 aa12.55□□□□□ -0.4
CACNA1A-220ENST00000635988 PDGFBP01127 241 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 SRFP11831 508 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms