RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 HOXA1P49639 335 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ERVK11-1P61568 191 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 C3AR1Q16581 482 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 BTNL8Q6UX41 500 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ACP7Q6ZNF0 438 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 CXorf67Q86X51 503 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-210ENST00000635776 BOLLQ8N9W6 283 aaKnown RBP3.87□□□□□ -1.79
SCN1A-210ENST00000635776 MBNL3Q9NUK0 354 aaKnown RBP3.87□□□□□ -1.79
SCN1A-210ENST00000635776 RBFOX3A6NFN3 312 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 H0YIZ8 118 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 PAX5Q02548 391 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ALKBH2Q6NS38 261 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 GFRALQ6UXV0 394 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 OR52M1Q8NGK5 317 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 FGFBP3Q8TAT2 258 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 TMEM204Q9BSN7 226 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 TOLLIPQ9H0E2 274 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 GAB2Q9UQC2 676 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ATG2BQ96BY7 2078 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 HGFACQ04756 655 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 CTXND1A0A1B0GTU2 59 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 MASP2O00187 686 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF324BQ6AW86 544 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF610Q8N9Z0 462 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 R3HDM4Q96D70 268 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 TP53RKQ96S44 253 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 REG4Q9BYZ8 158 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 UFSP2Q9NUQ7 469 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 SPRR3Q9UBC9 169 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 TRAV1-1A0A0B4J248 108 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 KIR2DL2P43627 348 aaPredicted RBP3.86□□□□□ -1.79
SCN1A-210ENST00000635776 COMPP49747 757 aaPredicted RBP3.86□□□□□ -1.79
SCN1A-210ENST00000635776 COX19Q49B96 90 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 RND1Q92730 232 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 GPR146Q96CH1 333 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 VAX2Q9UIW0 290 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 CEP290O15078 2479 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 KNTC1P50748 2209 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 IGHV2OR16-5A0A0B4J2B6 119 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 A0A1W2PN81 502 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 ODAMA1E959 279 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 CLDN34H7C241 214 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 YPEL1O60688 119 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 HBZP02008 142 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 PSG2P11465 335 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 PAX6P26367 422 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 CHRNA7P36544 502 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 RAB13P51153 203 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 NMSQ5H8A3 153 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 YPEL2Q96QA6 119 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 C19orf24Q9BVV8 132 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 ASCL3Q9NQ33 180 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 TRAV24A0A0B4J272 114 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 SRRM5B3KS81 715 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 F6UZH7 168 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 GPR37O15354 613 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 CECR9P0C854 216 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 WNT5AP41221 380 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 EDDM3AQ14507 147 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 OR52E5Q8NH55 327 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF71Q9NQZ8 489 aaPredicted RBP3.86□□□□□ -1.79
SCN1A-210ENST00000635776 DAOP14920 347 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 ASCL1P50553 236 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 S100A12P80511 92 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 VMA21Q3ZAQ7 101 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 TMEM41BQ5BJD5 291 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 ETFRF1Q6IPR1 90 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 PCSK4Q6UW60 755 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 FGFRL1Q8N441 504 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 LIPGQ9Y5X9 500 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 M0R1X1 148 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF83P51522 516 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 SLC35E3Q7Z769 313 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 TLNRD1Q9H1K6 362 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 CST7O76096 145 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 MC5RP33032 325 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 DYNLT3P51808 116 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 MRPS11P82912 194 aaKnown RBP3.86□□□□□ -1.79
SCN1A-210ENST00000635776 ERHP84090 104 aaKnown RBP3.86□□□□□ -1.79
SCN1A-210ENST00000635776 MRGPRDQ8TDS7 321 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 SLC35E1Q96K37 410 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 IGKV1D-8A0A087WSZ0 117 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.86□□□□□ -1.79
SCN1A-210ENST00000635776 IGLV1-44P01699 117 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 PDCD1Q15116 288 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 GUCA2BQ16661 112 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 DMRTC1Q5HYR2 192 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF506Q5JVG8 444 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 NUP37Q8NFH4 326 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 CHRDL1Q9BU40 450 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 COMMD5Q9GZQ3 224 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 PSG11Q9UQ72 335 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 PLXND1Q9Y4D7 1925 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 C12orf77C9JDV5 145 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 CD81P60033 236 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 WDFY1Q8IWB7 410 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 DRAM1Q8N682 238 aa3.86□□□□□ -1.79
SCN1A-210ENST00000635776 MAP1LC3B2A6NCE7 125 aa3.85□□□□□ -1.79
SCN1A-210ENST00000635776 MSGN1A6NI15 193 aa3.85□□□□□ -1.79
SCN1A-210ENST00000635776 E9PLN8 166 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms