RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 GLDNQ6ZMI3 551 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 FOXC2Q99958 501 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 AKIRIN1Q9H9L7 192 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 PAPPAQ13219 1627 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 CABIN1Q9Y6J0 2220 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 A0A0B4J2E0 115 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 A0A1B0GX12 115 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 OR2W5A6NFC9 320 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 TMEM229AB2RXF0 380 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 H3BRM9 83 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 NDUFB6O95139 128 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 CTSDP07339 412 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 PNLIPP16233 465 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 NKG7Q16617 165 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 HIKESHIQ53FT3 197 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 SLC25A53Q5H9E4 307 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 OR8B12Q8NGG6 310 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 DNASE2BQ8WZ79 361 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 JKAMPQ9P055 326 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 HSPB7Q9UBY9 170 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 RGPD3A6NKT7 1758 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 F5P12259 2224 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 LINC00862A6NCI5 91 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 CRPP02741 224 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 TFF2Q03403 129 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 MRPL58Q14197 206 aaKnown RBP4.86□□□□□ -1.63
SCN1A-209ENST00000635750 MRPL54Q6P161 138 aaKnown RBP4.86□□□□□ -1.63
SCN1A-209ENST00000635750 CLRN3Q8NCR9 226 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 IGHV5-10-1A0A0J9YXX1 117 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 CTSSP25774 331 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 P2RY6Q15077 328 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 LINC00303Q3SY05 128 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 FAM74A4Q5TZK3 123 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 ABLIM2Q6H8Q1 611 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 KIR3DL3Q8N743 410 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 LOXL4Q96JB6 756 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 OR2V2Q96R30 315 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 NEU1Q99519 415 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 PEMTQ9UBM1 199 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 PGPA6NDG6 321 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 CEACAM4O75871 244 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 CLDN14O95500 239 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 NPPCP23582 126 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 PRSS53Q2L4Q9 553 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 C2orf83Q53S99 150 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 ITLN2Q8WWU7 325 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-209ENST00000635750 GUCD1Q96NT3 240 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 FOXD3Q9UJU5 478 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-209ENST00000635750 WIPI2Q9Y4P8 454 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 PSMB11A5LHX3 300 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 NKX2-2O95096 273 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 CXCL10P02778 98 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 ASAH2BP0C7U1 165 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 FCGR2BP31994 310 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-209ENST00000635750 CCR2P41597 374 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 SELENOTP62341 195 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 DLK1P80370 383 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 ZNF770Q6IQ21 691 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-209ENST00000635750 DPPA3Q6W0C5 159 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 Q6ZNB5 142 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 C10orf126Q8N4M7 172 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 RASL10BQ96S79 203 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 TUBGCP6Q96RT7 1819 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 GAGE10A6NGK3 116 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 IL9P15248 144 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 CNTFRP26992 372 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 OR10J1P30954 320 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 SAMD13Q5VXD3 122 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 LSM10Q969L4 123 aaKnown RBP4.86□□□□□ -1.63
SCN1A-209ENST00000635750 DUSP15Q9H1R2 295 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-209ENST00000635750 PDFQ9HBH1 243 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 NPVFQ9HCQ7 196 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 J3QT63 122 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 HPRT1P00492 218 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 GALP22466 123 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 CCL8P80075 99 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 PMS2CLQ68D20 193 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 DUX3Q96PT4 197 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 WDR54Q9H977 334 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 A0A0G2JLM5 398 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 SOCS7O14512 581 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 IER3P46695 156 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 SRSF5Q13243 272 aaKnown RBP4.86□□□□□ -1.63
SCN1A-209ENST00000635750 SLC25A35Q3KQZ1 300 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 NSUN5P2Q63ZY6 315 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 GCSAMQ8N6F7 178 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 TBX21Q9UL17 535 aa4.86□□□□□ -1.63
SCN1A-209ENST00000635750 THADAQ6YHU6 1953 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 DDX60LQ5H9U9 1706 aaKnown RBP4.85□□□□□ -1.63
SCN1A-209ENST00000635750 IGLV3-27P01718 113 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 POLR2GP62487 172 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCN1A-209ENST00000635750 DHRS2Q13268 280 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 FAM27D1Q5T7N8 215 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 TCF24Q7RTU0 167 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PRSS27Q9BQR3 290 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 OR2H1Q9GZK4 316 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 YAE1D1Q9NRH1 226 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 SOX21Q9Y651 276 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PRR33A8MZF0 331 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 FCGR3AP08637 254 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms