RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ZBTB18Q99592 522 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RBBP8Q99708 897 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC29A1Q99808 456 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CCDC77Q9BR77 488 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CENPKQ9BS16 269 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 EMC6Q9BV81 110 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ANGPTL4Q9BY76 406 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 POTEKPQ9BYX7 375 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 WFDC10AQ9H1F0 79 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 VPS37BQ9H9H4 285 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 LRTM1Q9HBL6 345 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 FGF20Q9NP95 211 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 DYNLRB1Q9NP97 96 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 MYOZ1Q9NP98 299 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 MED29Q9NX70 200 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 STMN3Q9NZ72 180 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF639Q9UID6 485 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 FBXO5Q9UKT4 447 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PYCARDQ9ULZ3 195 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 GUCA1BQ9UMX6 200 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RNF11Q9Y3C5 154 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF337Q9Y3M9 751 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TIMM22Q9Y584 194 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 V9GYQ6 96 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 DNAH1Q9P2D7 4330 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SMIM26A0A096LP01 95 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 IGKV1D-43A0A0B4J1Z2 117 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 IGHV2OR16-5A0A0B4J2B6 119 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CENPVL3A0A0U1RRI6 287 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FAM240BA0A1B0GVZ2 78 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF98A6NK75 572 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF716A6NP11 495 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 BTNL10A8MVZ5 291 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 HACD1B0YJ81 288 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 GOLGA6L19H0YKK7 550 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 KLRC4-KLRK1H3BQV0 150 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 H7C417 338 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RAD51CO43502 376 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 EIF4E2O60573 245 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 KLHL41O60662 606 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CDH16O75309 829 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FKBP6O75344 327 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RP2O75695 350 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FGFR1OPO95684 399 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 EPPINO95925 133 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CYB5R3P00387 301 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 HLA-HP01893 362 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RPN2P04844 631 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ARG1P05089 322 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 KLK1P06870 262 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CRYGBP07316 175 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 TPM2P07951 284 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 MSMBP08118 114 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF735P0CB33 412 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR8G3PP0DMU2 310 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 TROVE2P10155 538 aaKnown RBP eCLIP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PIPP12273 146 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 GZMAP12544 262 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 GFAPP14136 432 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CELP19835 753 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 KITLGP21583 273 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 USF1P22415 310 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 HIST1H1TP22492 207 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 COL8A2P25067 703 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CD34P28906 385 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 HMOX2P30519 316 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 GRPRP30550 384 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OPRM1P35372 400 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FUSP35637 526 aaKnown RBP eCLIP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 VHLP40337 213 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 NAA10P41227 235 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PPP1R2P41236 205 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RBM34P42696 430 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CDKN2CP42773 168 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 MAGEA3P43357 314 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 KIR3DL2P43630 455 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 TTPAP49638 278 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 GDI2P50395 445 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FABP6P51161 128 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CTBP2P56545 445 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RWDD2BP57060 319 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RAB25P57735 213 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 TAS2R31P59538 309 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PLP1P60201 277 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RPL26P61254 145 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PPP1CBP62140 327 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RPS23P62266 143 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SNRPD2P62316 118 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RBX1P62877 108 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ADARB1P78563 741 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CCL8P80075 99 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FLI1Q01543 452 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 IRF8Q02556 426 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PRDX1Q06830 199 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 BST1Q10588 318 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 TFDP2Q14188 446 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 QPRTQ15274 297 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 GUSBP1Q15486 140 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR7A5Q15622 319 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SSX2Q16385 188 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms