RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PDZD11Q5EBL8 140 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 TMEM211Q6ICI0 200 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 FAM216BQ8N7L0 139 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 ZNF709Q8N972 641 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 PRSS33Q8NF86 280 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 OR13A1Q8NGR1 328 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 RNF138Q8WVD3 245 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 NEUROG1Q92886 237 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 ZDHHC16Q969W1 377 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 TM2D1Q9BX74 207 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 SPRY4Q9C004 299 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 KIAA1549Q9HCM3 1950 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 IGKV1-6A0A0C4DH72 117 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 TMEM30CPA0ZSE6 113 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 GFRA3O60609 400 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 SCAF4O95104 1147 aaKnown RBP6.35□□□□□ -1.39
PKP4-217ENST00000628904 CD55P08174 381 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 SFTA3P0C7M3 94 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 PRDX2P32119 198 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 EWSR1Q01844 656 aaKnown RBP eCLIP6.35□□□□□ -1.393e-7■■□□□ 13
PKP4-217ENST00000628904 TMEM187Q14656 261 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 CST9LP1Q5W188 147 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 ZNF529Q6P280 563 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 ABHD5Q8WTS1 349 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 IGFBPL1Q8WX77 278 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 MRPS24Q96EL2 167 aaKnown RBP6.35□□□□□ -1.39
PKP4-217ENST00000628904 C14orf79Q96F83 325 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 TECTBQ96PL2 329 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 NMES1Q9C002 83 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 NKX6-2Q9C056 277 aaPredicted RBP6.35□□□□□ -1.39
PKP4-217ENST00000628904 LRBAP50851 2863 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 MLNRO43193 412 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 JTBO76095 146 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 H2AFB1P0C5Y9 115 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 MUC1P15941 1255 aaPredicted RBP6.35□□□□□ -1.39
PKP4-217ENST00000628904 MDKP21741 143 aaPredicted RBP6.35□□□□□ -1.39
PKP4-217ENST00000628904 DTYMKP23919 212 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 HLA-DRB3P79483 266 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 GLRX5Q86SX6 157 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 LYPD6Q86Y78 171 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 MOB3AQ96BX8 217 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 STARD4Q96DR4 205 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 RARRES2Q99969 163 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 LPAR2Q9HBW0 351 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 MMP24Q9Y5R2 645 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 IGHV2OR16-5A0A0B4J2B6 119 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 A0A0G2JRQ6 117 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 C12orf77C9JDV5 145 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 ACTL6BO94805 426 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 F2RP25116 425 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 B2MP61769 119 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 AVPI1Q5T686 147 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 CRIP3Q6Q6R5 217 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 C22orf34Q6ZV56 151 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 POC1AQ8NBT0 407 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 TMEM45BQ96B21 275 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 GPR146Q96CH1 333 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 C10orf35Q96D05 121 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 USB1Q9BQ65 265 aaKnown RBP6.34□□□□□ -1.39
PKP4-217ENST00000628904 SLC25A22Q9H936 323 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 IGKV3D-15A0A087WSY6 115 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 IGHV1-18A0A0C4DH31 117 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 LINC00862A6NCI5 91 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 KRBOX1C9JBD0 128 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 CD37P11049 281 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 COX7A1P24310 79 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 ATP6V0CP27449 155 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 GNB1P62873 340 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 HIST1H3AP68431 136 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 NAAAQ02083 359 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 C4orf17Q53FE4 359 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 HIST2H3PS2Q5TEC6 136 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 INO80CQ6PI98 192 aaPredicted RBP6.34□□□□□ -1.39
PKP4-217ENST00000628904 ZNF474Q6S9Z5 364 aaPredicted RBP6.34□□□□□ -1.39
PKP4-217ENST00000628904 HIST2H3AQ71DI3 136 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 OR8G5Q8NG78 346 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 MRPL30Q8TCC3 161 aaKnown RBP6.34□□□□□ -1.39
PKP4-217ENST00000628904 RPUSD4Q96CM3 377 aaKnown RBP6.34□□□□□ -1.39
PKP4-217ENST00000628904 PKD1L2Q7Z442 2459 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 RNASEK-C17orf49H0YIS7 233 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 B3GALNT1O75752 331 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 S1PR2O95136 353 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 CEACAM1P13688 526 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 TNFSF4P23510 183 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 HOXA1P49639 335 aaPredicted RBP6.34□□□□□ -1.39
PKP4-217ENST00000628904 DRAM1Q8N682 238 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 OR4A16Q8NH70 328 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 LILRB1Q8NHL6 650 aaPredicted RBP6.34□□□□□ -1.39
PKP4-217ENST00000628904 SHARPINQ9H0F6 387 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 OR51I2Q9H344 312 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 GCM1Q9NP62 436 aa6.34□□□□□ -1.39
PKP4-217ENST00000628904 NAV3Q8IVL0 2385 aa6.34□□□□□ -1.4
PKP4-217ENST00000628904 WNK1Q9H4A3 2382 aa6.33□□□□□ -1.4
PKP4-217ENST00000628904 TRIM77I1YAP6 450 aa6.33□□□□□ -1.4
PKP4-217ENST00000628904 DEDDO75618 318 aa6.33□□□□□ -1.4
PKP4-217ENST00000628904 HSPB1P04792 205 aaKnown RBP6.33□□□□□ -1.4
PKP4-217ENST00000628904 EGR1P18146 543 aa6.33□□□□□ -1.4
PKP4-217ENST00000628904 CASP6P55212 293 aa6.33□□□□□ -1.4
PKP4-217ENST00000628904 ERVK-16P61578 105 aa6.33□□□□□ -1.4
PKP4-217ENST00000628904 FAHD2BQ6P2I3 314 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms