RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 IGHV3-72A0A0B4J1Y9 119 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 TRBV5-5A0A0J9YX44 114 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 HYPMO75409 117 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 DEDDO75618 318 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 RPL27AP46776 148 aaKnown RBP11.08□□□□□ -0.64
SCN8A-209ENST00000627620 HERVK_113P61574 105 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 SCGB1D4Q6XE38 83 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 ADIPOR1Q96A54 375 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 TMEM204Q9BSN7 226 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 KCNAB3O43448 404 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 SCTP09683 121 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 CEBPEQ15744 281 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 GCSAMQ8N6F7 178 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 SIRT7Q9NRC8 400 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 RGPD4Q7Z3J3 1758 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 ROM1Q03395 351 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 C19orf57Q0VDD7 668 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 DPPA3Q6W0C5 159 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 NPVFQ9HCQ7 196 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 IGLV1-36A0A0B4J1U3 117 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 VSIG10L2P0DP72 767 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 TGIF1Q15583 401 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 SLC16A13Q7RTY0 426 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 WFDC6Q9BQY6 131 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 PPP1R3EQ9H7J1 279 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 CISD1Q9NZ45 108 aaKnown RBP11.07□□□□□ -0.64
SCN8A-209ENST00000627620 SNURFLB1AK76 121 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 C4orf51C9J302 202 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 ISLRO14498 428 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF137PP52743 207 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 TMPRSS3P57727 454 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 PRNTQ86SH4 94 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 BET1LQ9NYM9 111 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 FOCADQ5VW36 1801 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 H0Y980 276 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF250P15622 560 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 HOXA4Q00056 320 aaPredicted RBP11.07□□□□□ -0.64
SCN8A-209ENST00000627620 GBGT1Q8N5D6 347 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 WNT2BQ93097 391 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 DLEC1Q9Y238 1755 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 FAM74A7A6NL05 159 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 GCM2O75603 506 aaPredicted RBP11.07□□□□□ -0.64
SCN8A-209ENST00000627620 HLA-DQB1P01920 261 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 APCSP02743 223 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 FAM216AQ8WUB2 273 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 GHITMQ9H3K2 345 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 DHRS7CA6NNS2 312 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 CEACAM18A8MTB9 384 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 CORTO00230 105 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 ID4P47928 161 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 PSMB2P49721 201 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 RUNX1Q01196 453 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 LYRM7Q5U5X0 104 aa11.07□□□□□ -0.64
SCN8A-209ENST00000627620 PACRGQ96M98 296 aaPredicted RBP11.07□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF638Q14966 1978 aaKnown RBP11.06□□□□□ -0.64
SCN8A-209ENST00000627620 CRXO43186 299 aaPredicted RBP11.06□□□□□ -0.64
SCN8A-209ENST00000627620 MC5RP33032 325 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 TMEM140Q9NV12 185 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 LMX1BO60663 402 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 CTSBP07858 339 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 SNRPCP09234 159 aaKnown RBP11.06□□□□□ -0.64
SCN8A-209ENST00000627620 COX6A1P12074 109 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 HIST1H1BP16401 226 aaKnown RBP11.06□□□□□ -0.64
SCN8A-209ENST00000627620 LRRC75BQ2VPJ9 315 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF645Q8N7E2 425 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 OR5AU1Q8NGC0 362 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 ADAMTS7Q9UKP4 1686 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 SHANK3Q9BYB0 1731 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 MARF1Q9Y4F3 1742 aaKnown RBP11.06□□□□□ -0.64
SCN8A-209ENST00000627620 CTSSP25774 331 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 OR10J1P30954 320 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 MEOX2P50222 304 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 SPANXN1Q5VSR9 72 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 CDCP2Q5VXM1 449 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 SHISA5Q8N114 240 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 TRAF4Q9BUZ4 470 aaPredicted RBP11.06□□□□□ -0.64
SCN8A-209ENST00000627620 METTL1Q9UBP6 276 aaKnown RBP11.06□□□□□ -0.64
SCN8A-209ENST00000627620 IL19Q9UHD0 177 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 KCNE5Q9UJ90 142 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 PXMP4Q9Y6I8 212 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 TRIP12Q14669 1992 aaPredicted RBP11.06□□□□□ -0.64
SCN8A-209ENST00000627620 C7orf66A4D0T2 115 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 ISG15P05161 165 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 FAM106CPP0CH98 169 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 HOXA6P31267 233 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 CEBPDP49716 269 aaPredicted RBP11.06□□□□□ -0.64
SCN8A-209ENST00000627620 DCAF12L2Q5VW00 463 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 ZDHHC8Q9ULC8 765 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 LHFPL6Q9Y693 200 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
SCN8A-209ENST00000627620 SP9P0CG40 484 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 COX6B1P14854 86 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 SNAI3Q3KNW1 292 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 OR8G5Q8NG78 346 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 TMEM222Q9H0R3 208 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 M0R143 59 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 ATXN7O15265 892 aaPredicted RBP11.05□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF735P0CB33 412 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 SERF2P84101 59 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms