RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 KMT2BQ9UMN6 2715 aaPredicted RBP9.86□□□□□ -0.83
LINC00538-201ENST00000626109 IGKV1D-43A0A0B4J1Z2 117 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 TMEM14DPA8MWL7 114 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 DUS4LO95620 317 aaKnown RBP9.86□□□□□ -0.83
LINC00538-201ENST00000626109 SMIM6P0DI80 62 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 CD33P20138 364 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 AKR1D1P51857 326 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 GRB2P62993 217 aaKnown RBP9.86□□□□□ -0.83
LINC00538-201ENST00000626109 RPL19P84098 196 aaKnown RBP9.86□□□□□ -0.83
LINC00538-201ENST00000626109 FAM90A2PQ658T7 463 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 COMMD2Q86X83 199 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 NOXO1Q8NFA2 376 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 OR10K1Q8NGX5 313 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 PPP1R1CQ8WVI7 109 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 ADAT3Q96EY9 351 aaPredicted RBP9.86□□□□□ -0.83
LINC00538-201ENST00000626109 GMPPAQ96IJ6 420 aaPredicted RBP9.86□□□□□ -0.83
LINC00538-201ENST00000626109 POM121L2Q96KW2 1035 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 EMC6Q9BV81 110 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 SELENOIQ9C0D9 397 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 RASL12Q9NYN1 266 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 SHANK1Q9Y566 2161 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 IGSF10Q6WRI0 2623 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 IGKV3D-15A0A087WSY6 115 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF726A6NNF4 738 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF724A8MTY0 619 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 SYNGR3O43761 229 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 LMX1BO60663 402 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 RLN2P04090 185 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 GLI4P10075 376 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 HRH1P35367 487 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 UNC119Q13432 240 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 PPP1R1AQ13522 171 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 IGFBP7Q16270 282 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 HAGHQ16775 308 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 LINC01620Q4KN68 170 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 ADAM5Q6NVV9 412 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 H2BFWTQ7Z2G1 175 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 RPRMLQ8N4K4 120 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 OR4K15Q8NH41 348 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 URM1Q9BTM9 101 aaKnown RBP9.86□□□□□ -0.83
LINC00538-201ENST00000626109 CDC42EP3Q9UKI2 254 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 FLVCR1Q9Y5Y0 555 aa9.86□□□□□ -0.83
LINC00538-201ENST00000626109 SVILO95425 2214 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 COL6A6A6NMZ7 2263 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 KIAA1549Q9HCM3 1950 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 NBEAQ8NFP9 2946 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 RNF222A6NCQ9 220 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 TRAF3IP2O43734 574 aaPredicted RBP9.85□□□□□ -0.83
LINC00538-201ENST00000626109 SS18L1O75177 396 aaPredicted RBP9.85□□□□□ -0.83
LINC00538-201ENST00000626109 PGA4P0DJD7 388 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 PGA3P0DJD8 388 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 GNB3P16520 340 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 GNLYP22749 145 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 RPL35P42766 123 aaKnown RBP9.85□□□□□ -0.83
LINC00538-201ENST00000626109 CX3CR1P49238 355 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 CLDN17P56750 224 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 NUTF2P61970 127 aaKnown RBP9.85□□□□□ -0.83
LINC00538-201ENST00000626109 BTN1A1Q13410 526 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 ELP2Q6IA86 826 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 GLIPR1L1Q6UWM5 242 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 SLC16A14Q7RTX9 510 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 STPG2Q8N412 459 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 ARRDC1Q8N5I2 433 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 PNLDC1Q8NA58 520 aaKnown RBP9.85□□□□□ -0.83
LINC00538-201ENST00000626109 HSD17B11Q8NBQ5 300 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 TERB2Q8NHR7 220 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 OR51E1Q8TCB6 317 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 RAB3CQ96E17 227 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 SEC22AQ96IW7 307 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 TMEM56Q96MV1 263 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 OR2V2Q96R30 315 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 ELOVL1Q9BW60 279 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF471Q9BX82 626 aaPredicted RBP9.85□□□□□ -0.83
LINC00538-201ENST00000626109 CST11Q9H112 138 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 GHRLQ9UBU3 117 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF230Q9UIE0 474 aaPredicted RBP9.85□□□□□ -0.83
LINC00538-201ENST00000626109 RALYQ9UKM9 306 aaKnown RBP9.85□□□□□ -0.83
LINC00538-201ENST00000626109 MRPS28Q9Y2Q9 187 aaKnown RBP9.85□□□□□ -0.83
LINC00538-201ENST00000626109 FAM96BQ9Y3D0 163 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 TMEM56-RWDD3S4R434 201 aa9.85□□□□□ -0.83
LINC00538-201ENST00000626109 hCG_38984A0A1B0GV85 526 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 J3QL48 77 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 CCL21O00585 134 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF205O95201 554 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 AKR1C4P17516 323 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF134P52741 427 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 TMEM128Q5BJH2 165 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 SLC25A47Q6Q0C1 308 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 AAED1Q7RTV5 226 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 NAA40Q86UY6 237 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 GVQW1Q8N7I0 195 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 CNEP1R1Q8N9A8 125 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 CMBLQ96DG6 245 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 MRPL53Q96EL3 112 aaKnown RBP9.84□□□□□ -0.83
LINC00538-201ENST00000626109 GPER1Q99527 375 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 TMEM59Q9BXS4 323 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 NMES1Q9C002 83 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 LHFPL6Q9Y693 200 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms