RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TMEM74BQ9NUR3 256 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 CTSVO60911 334 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 C6orf201Q7Z4U5 140 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 MS4A10Q96PG2 267 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TMEM70Q9BUB7 260 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 CA5AP35218 305 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 SAXO2Q658L1 398 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 RPUSD3Q6P087 351 aaKnown RBP5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TMEM92Q6UXU6 159 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 SIGLEC12Q96PQ1 595 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 M0R143 59 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 PITX1P78337 314 aaPredicted RBP5.49□□□□□ -1.53
CDKL5-205ENST00000623535 DEFA6Q01524 100 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 HAGHQ16775 308 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TCTEX1D1Q8N7M0 179 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 SSMEM1Q8WWF3 244 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 DKK4Q9UBT3 224 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 ELOA3CA0A087WX78 387 aaPredicted RBP5.49□□□□□ -1.53
CDKL5-205ENST00000623535 NKX2-2O95096 273 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 IGHA1P01876 353 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 IGHA2P01877 340 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 Q6ZSR9 355 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 VSTM2LQ96N03 204 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 SPSB2Q99619 263 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TREX1Q9NSU2 369 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TCRBV5S2A0A599 114 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 ZNF205O95201 554 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 SYS1Q8N2H4 156 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 AMER3Q8N944 861 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 EAF1Q96JC9 268 aaPredicted RBP5.48□□□□□ -1.53
CDKL5-205ENST00000623535 B9D1Q9UPM9 204 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 IGHV3OR16-10A0A075B7F0 116 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 A0A1W2PR48 441 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 RPL12P30050 165 aaKnown RBP5.48□□□□□ -1.53
CDKL5-205ENST00000623535 KLF9Q13886 244 aaPredicted RBP5.48□□□□□ -1.53
CDKL5-205ENST00000623535 C1QTNF12Q5T7M4 302 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 OR5H6Q8NGV6 325 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 FAM210AQ96ND0 272 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 DOCK1Q14185 1865 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 PGA4P0DJD7 388 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 PGA5P0DJD9 388 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 HIST1H1CP16403 213 aaKnown RBP5.48□□□□□ -1.53
CDKL5-205ENST00000623535 LIMK1P53667 647 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 TMEM123Q8N131 208 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 DNASE2BQ8WZ79 361 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 TOMM7Q9P0U1 55 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 HKR1P10072 659 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 CD99P14209 185 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 KISS1Q15726 138 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 HIKESHIQ53FT3 197 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 ACP7Q6ZNF0 438 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 RBM45Q8IUH3 476 aaKnown RBP5.48□□□□□ -1.53
CDKL5-205ENST00000623535 OR10AC1Q8NH08 325 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 CCL13Q99616 98 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 TMEM204Q9BSN7 226 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 WNT10AQ9GZT5 417 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 CMC2Q9NRP2 79 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 TRGV11A0A075B6L2 103 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 IGHV3OR15-7A0A075B7D8 119 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 HMGA1P17096 107 aaKnown RBP5.48□□□□□ -1.53
CDKL5-205ENST00000623535 MRPL13Q9BYD1 178 aaKnown RBP5.48□□□□□ -1.53
CDKL5-205ENST00000623535 MSL2Q9HCI7 577 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 RFPL4AA6NLU0 287 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 A8MWL6 223 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 RFPL4AL1F8VTS6 287 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 EPPINO95925 133 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 GATA4P43694 442 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 LILRA6Q6PI73 481 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 TXNDC17Q9BRA2 123 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 SNED1Q8TER0 1413 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 CLDN12P56749 244 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 CCBE1Q6UXH8 406 aaPredicted RBP5.48□□□□□ -1.53
CDKL5-205ENST00000623535 TMEM179BQ7Z7N9 219 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 ZBTB44Q8NCP5 570 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 KCNS1Q96KK3 526 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.48□□□□□ -1.53
CDKL5-205ENST00000623535 CEACAM18A8MTB9 384 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 APELAP0DMC3 54 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 NAT2P11245 290 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 CBR1P16152 277 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 FXYD3Q14802 87 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 ARHGAP5-AS1Q96IT6 56 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 DPM3Q9P2X0 92 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 KCNE1BA0A087WTH5 132 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 NDUFS8O00217 210 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 UQCC3Q6UW78 93 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 A0A1B0GUS0 222 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 PFN3P60673 137 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 PRNTQ86SH4 94 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 HSF4Q9ULV5 492 aa5.48□□□□□ -1.53
CDKL5-205ENST00000623535 IGLV3-10A0A075B6K4 115 aa5.47□□□□□ -1.53
CDKL5-205ENST00000623535 CLPSP04118 112 aa5.47□□□□□ -1.53
CDKL5-205ENST00000623535 JUNBP17275 347 aaPredicted RBP5.47□□□□□ -1.53
CDKL5-205ENST00000623535 Q8NFD4 153 aa5.47□□□□□ -1.53
CDKL5-205ENST00000623535 HPRT1P00492 218 aa5.47□□□□□ -1.53
CDKL5-205ENST00000623535 WNT2P09544 360 aa5.47□□□□□ -1.53
CDKL5-205ENST00000623535 HRH1P35367 487 aa5.47□□□□□ -1.53
CDKL5-205ENST00000623535 ALKAL1Q6UXT8 129 aa5.47□□□□□ -1.53
CDKL5-205ENST00000623535 VPS25Q9BRG1 176 aa5.47□□□□□ -1.53
CDKL5-205ENST00000623535 PMELP40967 661 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms