RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
TP53-227ENST00000622645 SYNGR2O43760 224 aa10.07□□□□□ -0.8
TP53-227ENST00000622645 TIMM8AO60220 97 aaPredicted RBP10.07□□□□□ -0.8
TP53-227ENST00000622645 SLC25A6P12236 298 aa10.07□□□□□ -0.8
TP53-227ENST00000622645 SULT1A1P50225 295 aa10.07□□□□□ -0.8
TP53-227ENST00000622645 LFNGQ8NES3 379 aa10.07□□□□□ -0.8
TP53-227ENST00000622645 OR52L2PQ8NGH6 319 aa10.07□□□□□ -0.8
TP53-227ENST00000622645 LSM10Q969L4 123 aaKnown RBP10.07□□□□□ -0.8
TP53-227ENST00000622645 GNPNAT1Q96EK6 184 aaPredicted RBP10.07□□□□□ -0.8
TP53-227ENST00000622645 TAAR6Q96RI8 345 aa10.07□□□□□ -0.8
TP53-227ENST00000622645 RAB40CQ96S21 281 aa10.07□□□□□ -0.8
TP53-227ENST00000622645 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
TP53-227ENST00000622645 METRNQ9UJH8 293 aa10.07□□□□□ -0.8
TP53-227ENST00000622645 TMEM30CPA0ZSE6 113 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 PRR33A8MZF0 331 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 WNT2P09544 360 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 METTL15P1P0C7V9 234 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 ARL16Q0P5N6 197 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 ACSF3Q4G176 576 aaPredicted RBP10.06□□□□□ -0.8
TP53-227ENST00000622645 OR2B11Q5JQS5 317 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 ALKBH2Q6NS38 261 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 WDR82Q6UXN9 313 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 THNSL2Q86YJ6 484 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 C12orf57Q99622 126 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 LIN7CQ9NUP9 197 aaKnown RBP10.06□□□□□ -0.8
TP53-227ENST00000622645 KCNIP1Q9NZI2 227 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 DKK4Q9UBT3 224 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 WSB1Q9Y6I7 421 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 INTS1Q8N201 2190 aaKnown RBP10.06□□□□□ -0.8
TP53-227ENST00000622645 RBFOX3A6NFN3 312 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 C1QTNF9BB2RNN3 333 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 RAMP3O60896 148 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 PTBP3O95758 552 aaKnown RBP10.06□□□□□ -0.8
TP53-227ENST00000622645 IL2RGP31785 369 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 GABRA2P47869 451 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 TAS2R30P59541 319 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 HAGHQ16775 308 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 AKR1C8PQ5T2L2 129 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 SLC25A24Q6NUK1 477 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 FIP1L1Q6UN15 594 aaKnown RBP10.06□□□□□ -0.8
TP53-227ENST00000622645 FGFRL1Q8N441 504 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 ZNF808Q8N4W9 903 aaPredicted RBP10.06□□□□□ -0.8
TP53-227ENST00000622645 MRGPRDQ8TDS7 321 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 GALMQ96C23 342 aa10.06□□□□□ -0.8
TP53-227ENST00000622645 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.05□□□□□ -0.8
TP53-227ENST00000622645 TNFSF13O75888 250 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
TP53-227ENST00000622645 ACP7Q6ZNF0 438 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 C5orf30Q96GV9 206 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 COQ2Q96H96 371 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 RSG1Q9BU20 258 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 OR2D2Q9H210 308 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 CXXC4Q9H2H0 198 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 PLSCR4Q9NRQ2 329 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 COA4Q9NYJ1 87 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 PSENENQ9NZ42 101 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 HBZP02008 142 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 ACAA1P09110 424 aaPredicted RBP10.05□□□□□ -0.8
TP53-227ENST00000622645 CEBPGP53567 150 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 RPL30P62888 115 aaKnown RBP10.05□□□□□ -0.8
TP53-227ENST00000622645 HABP2Q14520 560 aaPredicted RBP10.05□□□□□ -0.8
TP53-227ENST00000622645 C1orf162Q8NEQ5 155 aaPredicted RBP10.05□□□□□ -0.8
TP53-227ENST00000622645 STARD4Q96DR4 205 aa10.05□□□□□ -0.8
TP53-227ENST00000622645 PUS1Q9Y606 427 aaKnown RBP eCLIP10.05□□□□□ -0.8
TP53-227ENST00000622645 CACNA1GO43497 2377 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 PIGBOS1A0A0B4J2F0 54 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 IGHV1-18A0A0C4DH31 117 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 DFFBO76075 338 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 KRASP01116 189 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 IFNA5P01569 189 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 FBP1P09467 338 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 CEACAM1P13688 526 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 GLIPR1P48060 266 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 SOHLH1Q5JUK2 328 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 HAPLN4Q86UW8 402 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 RFESDQ8TAC1 157 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 ZNF71Q9NQZ8 489 aaPredicted RBP10.04□□□□□ -0.8
TP53-227ENST00000622645 IGHV2OR16-5A0A0B4J2B6 119 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 A0A1B0GW64 132 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 ARG1P05089 322 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 GCH1P30793 250 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 SSTR5P35346 364 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 LINC00205P59089 165 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 ZNF718Q3SXZ3 478 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 SPANXN5Q5MJ07 72 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 SP5Q6BEB4 398 aaPredicted RBP10.04□□□□□ -0.8
TP53-227ENST00000622645 SEM1Q6ZVN7 128 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 ZNF645Q8N7E2 425 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 C15orf54Q8N8G6 183 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 HIST1H2BAQ96A08 127 aa10.04□□□□□ -0.8
TP53-227ENST00000622645 USF3Q68DE3 2245 aa10.03□□□□□ -0.8
TP53-227ENST00000622645 IGHV3-43A0A0B4J1X8 118 aa10.03□□□□□ -0.8
TP53-227ENST00000622645 OOEPA6NGQ2 149 aa10.03□□□□□ -0.8
TP53-227ENST00000622645 IGLV1-44P01699 117 aa10.03□□□□□ -0.8
TP53-227ENST00000622645 IGHV3-43DP0DP04 118 aa10.03□□□□□ -0.8
TP53-227ENST00000622645 KITLGP21583 273 aa10.03□□□□□ -0.8
TP53-227ENST00000622645 G6PCP35575 357 aa10.03□□□□□ -0.8
TP53-227ENST00000622645 CD200P41217 278 aa10.03□□□□□ -0.8
TP53-227ENST00000622645 COL10A1Q03692 680 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms