RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 MRPL13Q9BYD1 178 aaKnown RBP6.82□□□□□ -1.32
VPS11-209ENST00000622309 NXT1Q9UKK6 140 aaKnown RBP6.82□□□□□ -1.32
VPS11-209ENST00000622309 ALPK2Q86TB3 2170 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 NOTCH4Q99466 2003 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 NKX2-6A6NCS4 301 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 CDIPTO14735 213 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 HS3ST1O14792 307 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 RAMP3O60896 148 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 ISG15P05161 165 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 GFRA1P56159 465 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 CLDN15P56746 228 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 PSG9Q00887 426 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 SMAGPQ0VAQ4 97 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 OR1B1Q8NGR6 318 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 OR52N5Q8NH56 324 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 RAB1CQ92928 201 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 POM121L2Q96KW2 1035 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
VPS11-209ENST00000622309 CLEC1BQ9P126 229 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 PIEZO1Q92508 2521 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 TRBV7-9A0A0J9YWB2 115 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 A0A1W2PP11 408 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 LATO43561 262 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 VENTXO95231 258 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 HAND1O96004 215 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 ANOS1P23352 680 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 CBLN1P23435 193 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 LINC00310P59036 64 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 PMCHL1Q16048 86 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 MPV17L2Q567V2 206 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 MRPL21Q7Z2W9 205 aaKnown RBP6.81□□□□□ -1.32
VPS11-209ENST00000622309 LRTM2Q8N967 370 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 CFHR4Q92496 578 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 IRF7Q92985 503 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 PSG11Q9UQ72 335 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 RNF114Q9Y508 228 aa6.81□□□□□ -1.32
VPS11-209ENST00000622309 B3GALT2O43825 422 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 BGLAPP02818 100 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 CA3P07451 260 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 LHX2P50458 406 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 YPEL3P61236 119 aaPredicted RBP6.8□□□□□ -1.32
VPS11-209ENST00000622309 PRDX1Q06830 199 aaKnown RBP6.8□□□□□ -1.32
VPS11-209ENST00000622309 ZIC1Q15915 447 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 TMEM249Q2WGJ8 235 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 FAM57BQ71RH2 274 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 SFTPA1Q8IWL2 248 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 ZIC4Q8N9L1 334 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 C5orf17Q8NAS9 161 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 SPSB4Q96A44 273 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 ADAT3Q96EY9 351 aaPredicted RBP6.8□□□□□ -1.32
VPS11-209ENST00000622309 CYYR1Q96J86 154 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 UHRF2Q96PU4 802 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 HDAC8Q9BY41 377 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 PEF1Q9UBV8 284 aaKnown RBP6.8□□□□□ -1.32
VPS11-209ENST00000622309 C11orf98E9PRG8 122 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 H0Y8G0 127 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 TRAPPC2LH3BP13 241 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 K7EQS6 105 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 ENSAO43768 121 aaKnown RBP6.8□□□□□ -1.32
VPS11-209ENST00000622309 NUDT3O95989 172 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 PNMTP11086 282 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 CPMP14384 443 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 ZNF823P16415 610 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 AZU1P20160 251 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 MDH2P40926 338 aaKnown RBP6.8□□□□□ -1.32
VPS11-209ENST00000622309 OR3A4PP47883 348 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 FMODQ06828 376 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 FOXL1Q12952 345 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 ZNF658BQ4V348 819 aaPredicted RBP6.8□□□□□ -1.32
VPS11-209ENST00000622309 GTF2H5Q6ZYL4 71 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 LRRC75AQ8NAA5 344 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 OR10P1Q8NGE3 313 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 AP1S3Q96PC3 154 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 SIGMAR1Q99720 223 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 GTSF1LQ9H1H1 148 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 VSIRQ9H7M9 311 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 TNFRSF18Q9Y5U5 241 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 SCN2AQ99250 2005 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 A0A1W2PPV4 95 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 FCN1O00602 326 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 C3orf79P0CE67 100 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 GUCA1AP43080 201 aaPredicted RBP6.8□□□□□ -1.32
VPS11-209ENST00000622309 CKS1BP61024 79 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 ZNF726P1Q15940 193 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 HLA-DRB5Q30154 266 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 ZNF695Q8IW36 515 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 CCDC71LQ8N9Z2 235 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 OR2Z1Q8NG97 314 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 PLPPR1Q8TBJ4 325 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 C8orf44Q96CB5 159 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 OR51B2Q9Y5P1 312 aa6.8□□□□□ -1.32
VPS11-209ENST00000622309 A0A1W2PPV9 198 aa6.79□□□□□ -1.32
VPS11-209ENST00000622309 KIAA1324LA8MWY0 1029 aaPredicted RBP6.79□□□□□ -1.32
VPS11-209ENST00000622309 F2Z2F3 143 aa6.79□□□□□ -1.32
VPS11-209ENST00000622309 NXPH3O95157 252 aa6.79□□□□□ -1.32
VPS11-209ENST00000622309 EDN2P20800 178 aa6.79□□□□□ -1.32
VPS11-209ENST00000622309 KITLGP21583 273 aa6.79□□□□□ -1.32
VPS11-209ENST00000622309 ZNF90Q03938 601 aa6.79□□□□□ -1.32
VPS11-209ENST00000622309 Q0VG73 95 aa6.79□□□□□ -1.32
VPS11-209ENST00000622309 CXorf66Q5JRM2 361 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms