RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 USF3Q68DE3 2245 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 LOC105371242A0A075B767 164 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 A0A1W2PPH5 198 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 C9orf170A2RU37 121 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 CRYM-AS1A6NIL9 109 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 C17orf98A8MV24 154 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 GPR31O00270 319 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 SLC31A2O15432 143 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 ST8SIA5O15466 376 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 RGS11O94810 467 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 IGLV2-14P01704 120 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 IGHV3-7P01780 117 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 LIPFP07098 398 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 VAMP1P23763 118 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 ERVFRD-1P60508 538 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 RND3P61587 244 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 RRAS2P62070 204 aaPredicted RBP8.75□□□□□ -1.01
CPNE3-212ENST00000621783 SUPT4H1P63272 117 aaKnown RBP8.75□□□□□ -1.01
CPNE3-212ENST00000621783 CLEC12BQ2HXU8 276 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 LRRC75A-AS1Q8N1F1 130 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 ZNF439Q8NDP4 499 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 OR2AK2Q8NG84 335 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 CHAC2Q8WUX2 184 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 LEAP2Q969E1 77 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 C5orf30Q96GV9 206 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 ABHD14AQ9BUJ0 271 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 IFI27L2Q9H2X8 130 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 NAA60Q9H7X0 242 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 PSG11Q9UQ72 335 aa8.75□□□□□ -1.01
CPNE3-212ENST00000621783 HMX3A6NHT5 357 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 ITGB1BP1O14713 200 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 TNFSF12O43508 249 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 SSNA1O43805 119 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 SFT2D2O95562 160 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 RBP4P02753 201 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 TRAPPC2P0DI81 140 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 TRAPPC2BP0DI82 140 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 IGHV1-8P0DP01 117 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 ZFP36P26651 326 aaKnown RBP8.74□□□□□ -1.01
CPNE3-212ENST00000621783 GNG10P50151 68 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 SLC9A3R2Q15599 337 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 C11orf91Q3C1V1 193 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 LY6G6FQ5SQ64 297 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 CD276Q5ZPR3 534 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 SGPP2Q8IWX5 399 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 C11orf42Q8N5U0 333 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 DRAM1Q8N682 238 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 ZNF645Q8N7E2 425 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 BVESQ8NE79 360 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 CASTOR1Q8WTX7 329 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 FAM216AQ8WUB2 273 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 RTN4IP1Q8WWV3 396 aaPredicted RBP8.74□□□□□ -1.01
CPNE3-212ENST00000621783 MBD6Q96DN6 1003 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 ABHD14BQ96IU4 210 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 GPHA2Q96T91 129 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 SUCNR1Q9BXA5 334 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 MED28Q9H204 178 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 ONECUT1Q9UBC0 465 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 RNF150Q9ULK6 438 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 SESN1Q9Y6P5 492 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 KIAA2026Q5HYC2 2103 aa8.74□□□□□ -1.01
CPNE3-212ENST00000621783 TENM4Q6N022 2769 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 A0A087X0M5 115 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 TEX13DA0A0J9YY54 714 aaPredicted RBP8.73□□□□□ -1.01
CPNE3-212ENST00000621783 A0A1B0GX30 115 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 A0A1W2PPE3 182 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 FAM157AC9JC47 383 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 ENSAO43768 121 aaKnown RBP8.73□□□□□ -1.01
CPNE3-212ENST00000621783 DUS4LO95620 317 aaKnown RBP8.73□□□□□ -1.01
CPNE3-212ENST00000621783 OR5AC1P0C628 307 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 SLC25A16P16260 332 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 CD34P28906 385 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 RAB7AP51149 207 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 ZNF134P52741 427 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 LCN2P80188 198 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 FCN2Q15485 313 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 MSMO1Q15800 293 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 Q3ZCU0 254 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 CT45A1Q5HYN5 189 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 TBC1D26Q86UD7 250 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 CMTM1Q8IZ96 169 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 C12orf45Q8N5I9 185 aaPredicted RBP8.73□□□□□ -1.01
CPNE3-212ENST00000621783 OR11H7Q8NGC8 314 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 CT45A3Q8NHU0 189 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 MITD1Q8WV92 249 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 AKR1E2Q96JD6 320 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 AGMATQ9BSE5 352 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 PRR13Q9NZ81 148 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 LRRK2Q5S007 2527 aa8.73□□□□□ -1.01
CPNE3-212ENST00000621783 DOPEY2Q9Y3R5 2298 aa8.72□□□□□ -1.01
CPNE3-212ENST00000621783 IGHV2-70DA0A0C4DH43 119 aa8.72□□□□□ -1.01
CPNE3-212ENST00000621783 M0R1W7 72 aa8.72□□□□□ -1.01
CPNE3-212ENST00000621783 MPPED1O15442 326 aa8.72□□□□□ -1.01
CPNE3-212ENST00000621783 PFDN1O60925 122 aa8.72□□□□□ -1.01
CPNE3-212ENST00000621783 FOXH1O75593 365 aa8.72□□□□□ -1.01
CPNE3-212ENST00000621783 PGLYRP1O75594 196 aaPredicted RBP8.72□□□□□ -1.01
CPNE3-212ENST00000621783 SLC22A5O76082 557 aa8.72□□□□□ -1.01
CPNE3-212ENST00000621783 IFNA2P01563 188 aa8.72□□□□□ -1.01
CPNE3-212ENST00000621783 SULT1A3P0DMM9 295 aa8.72□□□□□ -1.01
CPNE3-212ENST00000621783 SULT1A4P0DMN0 295 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms