RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 VDAC1P21796 283 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 EFNB2P52799 333 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 RASL11BQ9BPW5 248 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 KLK13Q9UKR3 277 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 TBL2Q9Y4P3 447 aaKnown RBP8.66□□□□□ -1.02
COL4A6-210ENST00000621266 KNL1Q8NG31 2342 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 A1L4Q6 167 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 PATE4P0C8F1 98 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 SMRP1Q8NCR6 262 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 WNT5BQ9H1J7 359 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 KLK15Q9H2R5 256 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 TREM2Q9NZC2 230 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 SERGEFQ9UGK8 458 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 TINAGQ9UJW2 476 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 KRTCAP3Q53RY4 240 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 TEPPQ6URK8 271 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 LRRC29Q8WV35 223 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 PAXXQ9BUH6 204 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 MT-ND6P03923 174 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 GPR3P46089 330 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 BEND2Q8NDZ0 799 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 PTPMT1Q8WUK0 201 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF665Q9H7R5 613 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 F5P12259 2224 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 PRR35P0CG20 571 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 JOSD1Q15040 202 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-210ENST00000621266 C19orf54Q5BKX5 351 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 WFDC3Q8IUB2 231 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF707Q96C28 371 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-210ENST00000621266 PMCHL2Q9BQD1 86 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 SPCS1Q9Y6A9 102 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 SCN4AP35499 1836 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 OR2A4O95047 310 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF32P17041 273 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 CKS1BP61024 79 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 OR2A7Q96R45 310 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 RGPD3A6NKT7 1758 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-210ENST00000621266 LAMB2P55268 1798 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 ADAMTS7Q9UKP4 1686 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 K7EQS6 105 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 HSPB1P04792 205 aaKnown RBP8.65□□□□□ -1.02
COL4A6-210ENST00000621266 PRF1P14222 555 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 PQLC2Q6ZP29 291 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 KISS1RQ969F8 398 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-210ENST00000621266 LINC00470Q9BZP3 86 aa8.65□□□□□ -1.02
COL4A6-210ENST00000621266 MBD1Q9UIS9 605 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-210ENST00000621266 NPIPB8E9PQR5 432 aa8.65□□□□□ -1.03
COL4A6-210ENST00000621266 NPIPB9F8W1W9 429 aa8.65□□□□□ -1.03
COL4A6-210ENST00000621266 OGG1O15527 345 aa8.65□□□□□ -1.03
COL4A6-210ENST00000621266 NPIPB7O75200 414 aa8.65□□□□□ -1.03
COL4A6-210ENST00000621266 DNAJB12Q9NXW2 375 aaKnown RBP8.65□□□□□ -1.03
COL4A6-210ENST00000621266 TSPAN2O60636 221 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 MYOZ1Q9NP98 299 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-210ENST00000621266 FCARP24071 287 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 MAS1LP35410 378 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 PABPC1L2AQ5JQF8 200 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 ZNF441Q8N8Z8 693 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 OR8G5Q8NG78 346 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 GABRG3Q99928 467 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 RTN4RQ9BZR6 473 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 SMDT1Q9H4I9 107 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 THYN1Q9P016 225 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 DPRXA6NFQ7 191 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 A8MWL6 223 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 HLA-DQA1P01909 254 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 AGAP20933 346 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 PIGYQ3MUY2 71 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 C2orf83Q53S99 150 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 SLC36A1Q7Z2H8 476 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 EAF1Q96JC9 268 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-210ENST00000621266 COL5A3P25940 1745 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-210ENST00000621266 CTLA4P16410 223 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 FCGR2BP31994 310 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-210ENST00000621266 MRPS11P82912 194 aaKnown RBP8.64□□□□□ -1.03
COL4A6-210ENST00000621266 LURAP1LQ8IV03 231 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 SH3BGRL3Q9H299 93 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 SLC52A3Q9NQ40 469 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 FCGR3AP08637 254 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 DSCR4P56555 118 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-210ENST00000621266 NAAAQ02083 359 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 BHLHA9Q7RTU4 235 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 SARAFQ96BY9 339 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 ZNF430Q9H8G1 570 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-210ENST00000621266 ZNF638Q14966 1978 aaKnown RBP8.64□□□□□ -1.03
COL4A6-210ENST00000621266 A0A1B0GU03 582 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 MPTX1A8MV57 137 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 FFAR1O14842 300 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 ZNF83P51522 516 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 ANKRD37Q7Z713 158 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 STXBP6Q8NFX7 210 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 NT5CQ8TCD5 201 aa8.64□□□□□ -1.03
COL4A6-210ENST00000621266 FNDC4Q9H6D8 234 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-210ENST00000621266 DOCK5Q9H7D0 1870 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 QSER1Q2KHR3 1735 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 CISD3P0C7P0 127 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 CT55Q8WUE5 264 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 JKAMPQ9P055 326 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 PXMP4Q9Y6I8 212 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms