RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 KCNK15Q9H427 330 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 MED9Q9NWA0 146 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 RASL12Q9NYN1 266 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 TAS2R8Q9NYW2 309 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 KIF25Q9UIL4 384 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 TBL2Q9Y4P3 447 aaKnown RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 TRAV18A0A075B6X5 111 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 TCRBV4S1A1TA0A5B7 111 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 OR5B21A6NL26 309 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 SYNGR1O43759 233 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 B3GALNT1O75752 331 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 RGS11O94810 467 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 CD74P04233 296 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 ISG15P05161 165 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 HOXD3P31249 432 aaPredicted RBP6.28□□□□□ -1.4
CLK1-215ENST00000621181 CEBPDP49716 269 aaPredicted RBP6.28□□□□□ -1.4
CLK1-215ENST00000621181 ARPC4P59998 168 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 PSMA6P60900 246 aaKnown RBP6.28□□□□□ -1.4
CLK1-215ENST00000621181 ACP7Q6ZNF0 438 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 IDO2Q6ZQW0 420 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 CENPVQ7Z7K6 275 aaPredicted RBP6.28□□□□□ -1.4
CLK1-215ENST00000621181 COMMD7Q86VX2 200 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 CD177Q8N6Q3 437 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 OR8B12Q8NGG6 310 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 OR13D1Q8NGV5 346 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 AQP3Q92482 292 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 DPF1Q92782 380 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 CHST6Q9GZX3 395 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 GPN1Q9HCN4 374 aaPredicted RBP6.28□□□□□ -1.4
CLK1-215ENST00000621181 ZNF107Q9UII5 783 aaPredicted RBP6.28□□□□□ -1.4
CLK1-215ENST00000621181 HILPDAQ9Y5L2 63 aa6.28□□□□□ -1.4
CLK1-215ENST00000621181 TSSC4Q9Y5U2 329 aaPredicted RBP6.28□□□□□ -1.4
CLK1-215ENST00000621181 LOC105371267A0A1B0GV96 52 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 MEX3AA1L020 520 aaKnown RBP6.27□□□□□ -1.41
CLK1-215ENST00000621181 NXPH2O95156 264 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 AKAIN1P0CW23 69 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 NFYAP23511 347 aaPredicted RBP6.27□□□□□ -1.41
CLK1-215ENST00000621181 PRDX2P32119 198 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 PRSS3P35030 304 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 FAUP35544 74 aaKnown RBP6.27□□□□□ -1.41
CLK1-215ENST00000621181 KRTAP10-11P60412 298 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 ODF4Q2M2E3 257 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 PLCXD3Q63HM9 321 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 TMEM65Q6PI78 240 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 CALHM1Q8IU99 346 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 CDH26Q8IXH8 852 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 TMEM229BQ8NBD8 167 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 OR2AK2Q8NG84 335 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 OR4X2Q8NGF9 303 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 OR5A2Q8NGI9 324 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 OR51S1Q8NGJ8 323 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 PCNPQ8WW12 178 aaKnown RBP6.27□□□□□ -1.41
CLK1-215ENST00000621181 PTX4Q96A99 478 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 B9D2Q9BPU9 175 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 GINS4Q9BRT9 223 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 SCPEP1Q9HB40 452 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 TAS2R4Q9NYW5 299 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 OR14J1Q9UGF5 321 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 R4GMQ9 66 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 A0A0A6YYH2 397 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 A0A1B0GTI1 187 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 MFSD2BA6NFX1 497 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 A6NJ64 397 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 ODF3BA8MYP8 253 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 H3BSH0 61 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 TK1P04183 234 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 CD3DP04234 171 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 NMBP08949 121 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 ZNF728P0DKX0 622 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 MPZP25189 248 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 HAAOP46952 286 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 DYNLT3P51808 116 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 RIDAP52758 137 aaKnown RBP6.27□□□□□ -1.41
CLK1-215ENST00000621181 EDDM3BP56851 147 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 QRFPP83859 136 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 LY6G6FQ5SQ64 297 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 STEAP1BQ6NZ63 245 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 ZNF529Q6P280 563 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 KCTD18Q6PI47 426 aaPredicted RBP6.27□□□□□ -1.41
CLK1-215ENST00000621181 DEGS2Q6QHC5 323 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 MOB3CQ70IA8 216 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 POC1AQ8NBT0 407 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 OR51A2Q8NGJ7 313 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 OR6M1Q8NGM8 313 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 TSEN15Q8WW01 171 aaKnown RBP6.27□□□□□ -1.41
CLK1-215ENST00000621181 ASB13Q8WXK3 278 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 AKR1E2Q96JD6 320 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 ZNF488Q96MN9 340 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 POLDIP2Q9Y2S7 368 aa6.27□□□□□ -1.41
CLK1-215ENST00000621181 TRAV14DV4A0A0A6YYC5 116 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 C17orf98A8MV24 154 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 SIX6O95475 246 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 NRASP01111 189 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 LPLP06858 475 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 IGHV1-8P0DP01 117 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 GTF2F2P13984 249 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 HTR2CP28335 458 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 EGFEM1PQ0D2K5 195 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 TCTEX1D4Q5JR98 221 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 LDLRAD2Q5SZI1 272 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms