RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 ANKRD60Q9BZ19 345 aa16.15■□□□□ 0.18
SMC6-210ENST00000621152 PLGRKTQ9HBL7 147 aa16.15■□□□□ 0.18
SMC6-210ENST00000621152 CHMP1AQ9HD42 196 aaPredicted RBP16.15■□□□□ 0.18
SMC6-210ENST00000621152 ABRACLQ9P1F3 81 aa16.15■□□□□ 0.18
SMC6-210ENST00000621152 NOTCH3Q9UM47 2321 aa16.15■□□□□ 0.18
SMC6-210ENST00000621152 CRHBPP24387 322 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 MAP2K4P45985 399 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 THBS3P49746 956 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 LSAMPQ13449 338 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 TRAM1Q15629 374 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 HMGN3Q15651 99 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 LY6G6FQ5SQ64 297 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 C8orf86Q6ZUL3 223 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 MRPL41Q8IXM3 137 aaKnown RBP16.14■□□□□ 0.17
SMC6-210ENST00000621152 LINC00482Q8N8I6 264 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 IL1F10Q8WWZ1 152 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 GFI1Q99684 422 aa16.14■□□□□ 0.17
SMC6-210ENST00000621152 URM1Q9BTM9 101 aaKnown RBP16.14■□□□□ 0.17
SMC6-210ENST00000621152 A0A0A6YYD4 124 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 SOCS1O15524 211 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 ARL6IP5O75915 188 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 DUS4LO95620 317 aaKnown RBP16.13■□□□□ 0.17
SMC6-210ENST00000621152 ARSBP15848 533 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 CPEP16870 476 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 SOX6P35712 828 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 OR3A3P47888 321 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 MLLT11Q13015 90 aaPredicted RBP16.13■□□□□ 0.17
SMC6-210ENST00000621152 ETV3LQ6ZN32 361 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 PRSS48Q7RTY5 328 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 KLHL30-AS1Q8NEE0 82 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 RITA1Q96K30 269 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 MGLLQ99685 303 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 HSPB9Q9BQS6 159 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 LPAR5Q9H1C0 372 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 VCX3BQ9H321 246 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 STEAP1Q9UHE8 339 aa16.13■□□□□ 0.17
SMC6-210ENST00000621152 SLC17A2O00624 439 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 NAPSAO96009 420 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 PSMA1P25786 263 aaKnown RBP16.12■□□□□ 0.17
SMC6-210ENST00000621152 SLC6A1P30531 599 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 MYCNOSP40205 109 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 ZNF695Q8IW36 515 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 SVOPQ8N4V2 548 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 FAM89BQ8N5H3 189 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 FAM71E2Q8N5Q1 922 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 OR2AK2Q8NG84 335 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 NABP2Q9BQ15 211 aa16.12■□□□□ 0.17
SMC6-210ENST00000621152 MRPL20Q9BYC9 149 aaKnown RBP16.12■□□□□ 0.17
SMC6-210ENST00000621152 RIMS4Q9H426 269 aaPredicted RBP16.12■□□□□ 0.17
SMC6-210ENST00000621152 RRP9O43818 475 aaKnown RBP16.11■□□□□ 0.17
SMC6-210ENST00000621152 RPLP1P05386 114 aaKnown RBP16.11■□□□□ 0.17
SMC6-210ENST00000621152 FABP5Q01469 135 aa16.11■□□□□ 0.17
SMC6-210ENST00000621152 MMDQ15546 238 aa16.11■□□□□ 0.17
SMC6-210ENST00000621152 RAB11BQ15907 218 aa16.11■□□□□ 0.17
SMC6-210ENST00000621152 CXorf66Q5JRM2 361 aaPredicted RBP16.11■□□□□ 0.17
SMC6-210ENST00000621152 ZNF880Q6PDB4 577 aa16.11■□□□□ 0.17
SMC6-210ENST00000621152 LCNL1Q6ZST4 164 aa16.11■□□□□ 0.17
SMC6-210ENST00000621152 ZNF833PQ6ZTB9 187 aa16.11■□□□□ 0.17
SMC6-210ENST00000621152 CNBD2Q96M20 576 aa16.11■□□□□ 0.17
SMC6-210ENST00000621152 AK3Q9UIJ7 227 aa16.11■□□□□ 0.17
SMC6-210ENST00000621152 PRKDCP78527 4128 aaKnown RBP16.11■□□□□ 0.17
SMC6-210ENST00000621152 SLC2A2P11168 524 aaPredicted RBP16.1■□□□□ 0.17
SMC6-210ENST00000621152 CALRP27797 417 aaKnown RBP16.1■□□□□ 0.17
SMC6-210ENST00000621152 VEGFCP49767 419 aa16.1■□□□□ 0.17
SMC6-210ENST00000621152 CLDN12P56749 244 aa16.1■□□□□ 0.17
SMC6-210ENST00000621152 KRTAP10-11P60412 298 aa16.1■□□□□ 0.17
SMC6-210ENST00000621152 ACTBP60709 375 aa16.1■□□□□ 0.17
SMC6-210ENST00000621152 C2orf76Q3KRA6 126 aa16.1■□□□□ 0.17
SMC6-210ENST00000621152 IZUMO2Q6UXV1 221 aa16.1■□□□□ 0.17
SMC6-210ENST00000621152 DUX3Q96PT4 197 aa16.1■□□□□ 0.17
SMC6-210ENST00000621152 ZNF251Q9BRH9 671 aa16.1■□□□□ 0.17
SMC6-210ENST00000621152 ZNF107Q9UII5 783 aaPredicted RBP16.1■□□□□ 0.17
SMC6-210ENST00000621152 SAA2-SAA4A0A096LPE2 208 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 ST8SIA5O15466 376 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 ELANEP08246 267 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 SAA2P0DJI9 122 aaPredicted RBP16.09■□□□□ 0.17
SMC6-210ENST00000621152 VDAC1P21796 283 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 CNTFRP26992 372 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 HOXD3P31249 432 aaPredicted RBP16.09■□□□□ 0.17
SMC6-210ENST00000621152 TMEM50BP56557 158 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 FOXE3Q13461 319 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 FAM3DQ96BQ1 224 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 P2RX4Q99571 388 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 HDHD3Q9BSH5 251 aaPredicted RBP16.09■□□□□ 0.17
SMC6-210ENST00000621152 ACOT13Q9NPJ3 140 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 PIPOXQ9P0Z9 390 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 HSF4Q9ULV5 492 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 V9GY05 133 aa16.09■□□□□ 0.17
SMC6-210ENST00000621152 TRBV6-6A0A0A6YYG2 114 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 ERICH4A6NGS2 130 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 CCL24O00175 119 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 CEACAM6P40199 344 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 HSPA13P48723 471 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 PSMD7P51665 324 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 DEFB121Q5J5C9 76 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 MOB1BQ7L9L4 216 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 KCTD7Q96MP8 289 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 MCRIP2Q9BUT9 160 aaKnown RBP16.08■□□□□ 0.16
SMC6-210ENST00000621152 GPR61Q9BZJ8 451 aa16.08■□□□□ 0.16
SMC6-210ENST00000621152 IFI27L2Q9H2X8 130 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms