RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 OR2Y1Q8NGV0 311 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 IL1F10Q8WWZ1 152 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 LHX4Q969G2 390 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 TMEM45BQ96B21 275 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 PRRG4Q9BZD6 226 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 ACTR3CQ9C0K3 210 aaPredicted RBP16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 FSCN3Q9NQT6 498 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 LAMP3Q9UQV4 416 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 NPIPB11E5RHQ5 1161 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 DEGS1O15121 323 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 ST8SIA5O15466 376 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 SS18L1O75177 396 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 TRAPPC6AO75865 159 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 SPINK2P20155 84 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 RPL23P62829 140 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 BSXQ3C1V8 233 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 C9orf135Q5VTT2 229 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 C2orf88Q9BSF0 95 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 UBE2L5PA0A1B0GUS4 154 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 LRP5LA4QPB2 252 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 P2RY6Q15077 328 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 TESK1Q15569 626 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 SPANXN5Q5MJ07 72 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 SPEM1Q8N4L4 309 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 HIST1H2AAQ96QV6 131 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 STRADBQ9C0K7 418 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 DLL3Q9NYJ7 618 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 PPP1R3CQ9UQK1 317 aa16.6■□□□□ 0.25
PDLIM3-212ENST00000620787 ZNF503-AS2A6NEH8 195 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 ARGFXA6NJG6 315 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 A8MWP6 167 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 ERVS71-1P61550 626 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 ZNF664Q8N3J9 261 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 APOBEC3DQ96AK3 386 aaPredicted RBP16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 SLC39A9Q9NUM3 307 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 XKRY2A2RUG3 117 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 NGFP01138 241 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 TUBG1P23258 451 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 GALR1P47211 349 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 SLC38A11Q08AI6 406 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 OR5P3Q8WZ94 311 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 RAB24Q969Q5 203 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 RPUSD4Q96CM3 377 aaKnown RBP16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 MISP3Q96FF7 219 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 TMEM9BQ9NQ34 198 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 DEPPQ9NTK1 212 aa16.59■□□□□ 0.25
PDLIM3-212ENST00000620787 CEACAM6P40199 344 aa16.58■□□□□ 0.25
PDLIM3-212ENST00000620787 TLE1Q04724 770 aa16.58■□□□□ 0.25
PDLIM3-212ENST00000620787 ELOVL1Q9BW60 279 aa16.58■□□□□ 0.25
PDLIM3-212ENST00000620787 TIMM9Q9Y5J7 89 aa16.58■□□□□ 0.25
PDLIM3-212ENST00000620787 TRAV39A0A0B4J263 110 aa16.58■□□□□ 0.24
PDLIM3-212ENST00000620787 MRPL33O75394 65 aaKnown RBP16.58■□□□□ 0.24
PDLIM3-212ENST00000620787 CCL4P13236 92 aa16.58■□□□□ 0.24
PDLIM3-212ENST00000620787 FOXG1P55316 489 aaPredicted RBP16.58■□□□□ 0.24
PDLIM3-212ENST00000620787 LBHQ53QV2 105 aaPredicted RBP16.58■□□□□ 0.24
PDLIM3-212ENST00000620787 ACSM6Q6P461 480 aa16.58■□□□□ 0.24
PDLIM3-212ENST00000620787 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.58■□□□□ 0.24
PDLIM3-212ENST00000620787 FAM58AQ8N1B3 248 aa16.58■□□□□ 0.24
PDLIM3-212ENST00000620787 ARHGAP21Q5T5U3 1957 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 TMEM250H0YL14 139 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 H7BYZ3 331 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 LILRA1O75019 489 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 FOSL1P15407 271 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 PDLIM4P50479 330 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 GFRA1P56159 465 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 RTP5Q14D33 572 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 TCEAL6Q6IPX3 200 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 NOL4LQ96MY1 436 aaPredicted RBP16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 LINC00470Q9BZP3 86 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 PARLQ9H300 379 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 ZNF576Q9H609 170 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 LIN7CQ9NUP9 197 aaKnown RBP16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 PPP5D1E7EU14 171 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 COX5BP10606 129 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 ZNF16P17020 682 aaPredicted RBP16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 TMEM14EPQ6UXP3 125 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 ZNF66Q6ZN08 573 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 IFI44Q8TCB0 444 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 TMEM170AQ8WVE7 144 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 PCGF1Q9BSM1 259 aa16.57■□□□□ 0.24
PDLIM3-212ENST00000620787 PINLYPA6NC86 204 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 K7ESF4 209 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 HMGB3O15347 200 aaKnown RBP16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 IL18BPO95998 194 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 HRASP01112 189 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 GDF1P27539 372 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 Q0VFX4 171 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 OR5B12Q96R08 314 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 SLC25A22Q9H936 323 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 IGKV3D-15A0A087WSY6 115 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 APLNRP35414 380 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 FOLR3P41439 243 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 PSMB3P49720 205 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 OR8G2PQ6IF36 304 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 MYPOPQ86VE0 399 aaPredicted RBP16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 ACY3Q96HD9 319 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 NDUFAF3Q9BU61 184 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 KCNS2Q9ULS6 477 aa16.56■□□□□ 0.24
PDLIM3-212ENST00000620787 GCGP01275 180 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms