RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ANGPTL6Q8NI99 470 aa13.15□□□□□ -0.3
CD40-207ENST00000620709 DNTTIP1Q9H147 329 aa13.15□□□□□ -0.3
CD40-207ENST00000620709 RNF114Q9Y508 228 aa13.15□□□□□ -0.3
CD40-207ENST00000620709 RNASEK-C17orf49H0YIS7 233 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 NPFFO15130 113 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 LMO1P25800 156 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 ARPC4P59998 168 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 SRSF7Q16629 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
CD40-207ENST00000620709 TATDN3Q17R31 274 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 IDO2Q6ZQW0 420 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 LDLRAD3Q86YD5 345 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 FAM185AQ8N0U4 392 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 CADM3Q8N126 398 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 Q8N7P7 452 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 GINS4Q9BRT9 223 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 SEBOXQ9HB31 216 aaPredicted RBP13.14□□□□□ -0.31
CD40-207ENST00000620709 ANXA10Q9UJ72 324 aa13.14□□□□□ -0.31
CD40-207ENST00000620709 TRBV6-6A0A0A6YYG2 114 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 RFPL4AA6NLU0 287 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 RFPL4AL1F8VTS6 287 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 PFDN1O60925 122 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 KCNJ3P48549 501 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 RAB25P57735 213 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 CDK10Q15131 360 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 SCGB2B2Q4G0G5 96 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 Q6ZS49 121 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 TMEM17Q86X19 198 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 ZNRF1Q8ND25 227 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 SLC25A21Q9BQT8 299 aaPredicted RBP13.13□□□□□ -0.31
CD40-207ENST00000620709 PPA2Q9H2U2 334 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 EHFQ9NZC4 300 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 IGKV1D-8A0A087WSZ0 117 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 A0A0B4J293 547 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
CD40-207ENST00000620709 SIGLEC5O15389 551 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 PEX14O75381 377 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 PSG2P11465 335 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 CEBPDP49716 269 aaPredicted RBP13.13□□□□□ -0.31
CD40-207ENST00000620709 TSPAN5P62079 268 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 DHRS7BQ6IAN0 325 aaPredicted RBP13.13□□□□□ -0.31
CD40-207ENST00000620709 MRPL30Q8TCC3 161 aaKnown RBP13.13□□□□□ -0.31
CD40-207ENST00000620709 Q9N2K0 584 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 NECAP2Q9NVZ3 263 aa13.13□□□□□ -0.31
CD40-207ENST00000620709 IGKV1D-17A0A075B6S4 117 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 DEFA6Q01524 100 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 COL10A1Q03692 680 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 GRK1Q15835 563 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 Q6ZPA2 131 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 MOB1BQ7L9L4 216 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 OVCH2Q7RTZ1 564 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 LINC01006Q8NI28 216 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 C8orf46Q8TAG6 207 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 ZNRD1Q9P1U0 126 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 FLVCR2Q9UPI3 526 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 ALG5Q9Y673 324 aa13.12□□□□□ -0.31
CD40-207ENST00000620709 PSPNO60542 156 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 PRAF2O60831 178 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 PRDX2P32119 198 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 SAA4P35542 130 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 KIR2DS4P43632 304 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 MECP2P51608 486 aaKnown RBP13.11□□□□□ -0.31
CD40-207ENST00000620709 KRTAP10-3P60369 221 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 RPL15P61313 204 aaKnown RBP13.11□□□□□ -0.31
CD40-207ENST00000620709 KIR2DS1Q14954 304 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 ATXN7L3Q14CW9 347 aaPredicted RBP13.11□□□□□ -0.31
CD40-207ENST00000620709 NCR3LG1Q68D85 454 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 ZNF497Q6ZNH5 498 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 CD177Q8N6Q3 437 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 OR13C8Q8NGS7 320 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 PPP1R35Q8TAP8 253 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 PLPPR1Q8TBJ4 325 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 DMRTB1Q96MA1 342 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 METTL8Q9H825 291 aaKnown RBP13.11□□□□□ -0.31
CD40-207ENST00000620709 MGAT4AQ9UM21 535 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 MAB21L2Q9Y586 359 aa13.11□□□□□ -0.31
CD40-207ENST00000620709 M0QZ24 198 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 M0R1W7 72 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 SDCBPO00560 298 aaPredicted RBP13.1□□□□□ -0.31
CD40-207ENST00000620709 TIMM23O14925 209 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 RLN1P04808 185 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 OR3A1P47881 315 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 MIDNQ504T8 468 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 ZNF880Q6PDB4 577 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 Q6ZSV7 163 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 GAPTQ8N292 157 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 ASCC1Q8N9N2 400 aaKnown RBP13.1□□□□□ -0.31
CD40-207ENST00000620709 TERB2Q8NHR7 220 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 GIMAP1Q8WWP7 306 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 CITED1Q99966 193 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 VPREB3Q9UKI3 123 aa13.1□□□□□ -0.31
CD40-207ENST00000620709 TMEM82A0PJX8 343 aa13.09□□□□□ -0.31
CD40-207ENST00000620709 TMEM30CPA0ZSE6 113 aa13.09□□□□□ -0.31
CD40-207ENST00000620709 C7orf66A4D0T2 115 aa13.09□□□□□ -0.31
CD40-207ENST00000620709 OR5H8P0DN80 308 aa13.09□□□□□ -0.31
CD40-207ENST00000620709 UBE2E1P51965 193 aa13.09□□□□□ -0.31
CD40-207ENST00000620709 SLC35E4Q6ICL7 350 aa13.09□□□□□ -0.31
CD40-207ENST00000620709 CHAC2Q8WUX2 184 aa13.09□□□□□ -0.31
CD40-207ENST00000620709 TNFRSF14Q92956 283 aa13.09□□□□□ -0.31
CD40-207ENST00000620709 C19orf12Q9NSK7 152 aa13.09□□□□□ -0.31
CD40-207ENST00000620709 ZNF222Q9UK12 451 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms