RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SULT4A1Q9BR01 284 aa17.25■□□□□ 0.35
SRRT-218ENST00000620394 DCLRE1BQ9H816 532 aa17.25■□□□□ 0.35
SRRT-218ENST00000620394 PPP1CCP36873 323 aaKnown RBP17.24■□□□□ 0.35
SRRT-218ENST00000620394 CDX1P47902 265 aaPredicted RBP17.24■□□□□ 0.35
SRRT-218ENST00000620394 NKAPLQ5M9Q1 402 aa17.24■□□□□ 0.35
SRRT-218ENST00000620394 GLT8D1Q68CQ7 371 aa17.24■□□□□ 0.35
SRRT-218ENST00000620394 RBMXL1Q96E39 390 aaKnown RBP17.24■□□□□ 0.35
SRRT-218ENST00000620394 TM2D1Q9BX74 207 aa17.24■□□□□ 0.35
SRRT-218ENST00000620394 TMEM59Q9BXS4 323 aa17.24■□□□□ 0.35
SRRT-218ENST00000620394 LSM4Q9Y4Z0 139 aaKnown RBP17.24■□□□□ 0.35
SRRT-218ENST00000620394 CCL24O00175 119 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 SLC22A1O15245 554 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 UNC119Q13432 240 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 RBM48Q5RL73 367 aaKnown RBP17.23■□□□□ 0.35
SRRT-218ENST00000620394 OR10K2Q6IF99 312 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 LCNL1Q6ZST4 164 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 ZNF833PQ6ZTB9 187 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 C5orf24Q7Z6I8 188 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 OR8U1Q8NH10 309 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 MYOZ3Q8TDC0 251 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 NEDD4LQ96PU5 975 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 NABP2Q9BQ15 211 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 TMED9Q9BVK6 235 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 MRPL20Q9BYC9 149 aaKnown RBP17.23■□□□□ 0.35
SRRT-218ENST00000620394 LRRC42Q9Y546 428 aa17.23■□□□□ 0.35
SRRT-218ENST00000620394 TMEM14DPA8MWL7 114 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 RGS11O94810 467 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 NAPSAO96009 420 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 UCHL1P09936 223 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 VDAC1P21796 283 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 PSMB8P28062 276 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 QRFPP83859 136 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 IRF3Q14653 427 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 KIR2DS1Q14954 304 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 SPHARQ15513 63 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 MMDQ15546 238 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 FAM71F2Q6NXP2 309 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 ZNF880Q6PDB4 577 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 SVOPQ8N4V2 548 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 KCNG3Q8TAE7 436 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 GALMQ96C23 342 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 DUX3Q96PT4 197 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 CHCHD6Q9BRQ6 235 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 IFI27L2Q9H2X8 130 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 ZNF107Q9UII5 783 aaPredicted RBP17.22■□□□□ 0.35
SRRT-218ENST00000620394 STAB2Q8WWQ8 2551 aa17.22■□□□□ 0.35
SRRT-218ENST00000620394 SAA2-SAA4A0A096LPE2 208 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 HLA-DRB1P01911 266 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 SAA2P0DJI9 122 aaPredicted RBP17.21■□□□□ 0.35
SRRT-218ENST00000620394 OR5H8P0DN80 308 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 ACTBP60709 375 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 FHL3Q13643 280 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 DEFB136Q30KP8 78 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 HSD17B12Q53GQ0 312 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 C6orf201Q7Z4U5 140 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 C4orf3Q8WVX3 66 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 KCTD7Q96MP8 289 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 NICN1Q9BSH3 213 aa17.21■□□□□ 0.35
SRRT-218ENST00000620394 BPNT1O95861 308 aa17.2■□□□□ 0.34
SRRT-218ENST00000620394 SLC2A2P11168 524 aaPredicted RBP17.2■□□□□ 0.34
SRRT-218ENST00000620394 SRMP19623 302 aa17.2■□□□□ 0.34
SRRT-218ENST00000620394 HTR2CP28335 458 aa17.2■□□□□ 0.34
SRRT-218ENST00000620394 MOB1BQ7L9L4 216 aa17.2■□□□□ 0.34
SRRT-218ENST00000620394 OR2AK2Q8NG84 335 aa17.2■□□□□ 0.34
SRRT-218ENST00000620394 OR6M1Q8NGM8 313 aa17.2■□□□□ 0.34
SRRT-218ENST00000620394 FAAP24Q9BTP7 215 aa17.2■□□□□ 0.34
SRRT-218ENST00000620394 KCNK15Q9H427 330 aa17.2■□□□□ 0.34
SRRT-218ENST00000620394 RYR2Q92736 4967 aa17.2■□□□□ 0.34
SRRT-218ENST00000620394 PTGES3LE9PB15 166 aa17.19■□□□□ 0.34
SRRT-218ENST00000620394 MYF6P23409 242 aa17.19■□□□□ 0.34
SRRT-218ENST00000620394 PPIFP30405 207 aaKnown RBP17.19■□□□□ 0.34
SRRT-218ENST00000620394 CASC10Q5T4H9 136 aa17.19■□□□□ 0.34
SRRT-218ENST00000620394 CEACAM19Q7Z692 300 aa17.19■□□□□ 0.34
SRRT-218ENST00000620394 MUC7Q8TAX7 377 aa17.19■□□□□ 0.34
SRRT-218ENST00000620394 SCN3BQ9NY72 215 aa17.19■□□□□ 0.34
SRRT-218ENST00000620394 ABRACLQ9P1F3 81 aa17.19■□□□□ 0.34
SRRT-218ENST00000620394 A0A0A6YYD4 124 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 TRBV6-6A0A0A6YYG2 114 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 NBR2O15453 112 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 NDUFA3O95167 84 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 OR3A3P47888 321 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 MED22Q15528 200 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 NPBQ8NG41 125 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 OR5M8Q8NGP6 311 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 RITA1Q96K30 269 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 PRR25Q96S07 402 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 ZNF251Q9BRH9 671 aa17.18■□□□□ 0.34
SRRT-218ENST00000620394 IGHV7-81A0A0B4J1V7 117 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 ATP6V0E1O15342 81 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 CNTFRP26992 372 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 LUMP51884 338 aaPredicted RBP17.17■□□□□ 0.34
SRRT-218ENST00000620394 AQP4P55087 323 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 TPBGQ13641 420 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 C5orf64Q2M2E5 130 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 LIPKQ5VXJ0 399 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 UFD1Q92890 307 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 GFI1Q99684 422 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 LPAR5Q9H1C0 372 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 OR51J1Q9H342 316 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 DUSP21Q9H596 190 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms