RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 RPRMQ9NS64 109 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 KLHL13Q9P2N7 655 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 PHF1O43189 567 aaPredicted RBP13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 HYPMO75409 117 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 VAMP5O95183 116 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 ACP1P24666 158 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 UBE2NP61088 152 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 DCAF12Q5T6F0 453 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 OR2D3Q8NGH3 330 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF596Q8TC21 504 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 TXNIPQ9H3M7 391 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 ST3GAL6Q9Y274 331 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 RNF114Q9Y508 228 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 PHF3Q92576 2039 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 EXPH5Q8NEV8 1989 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 PROB1E7EW31 1015 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 DXOO77932 396 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 SERPINA7P05543 415 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF20P17024 532 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 TESK1Q15569 626 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 OR11L1Q8NGX0 322 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 RSG1Q9BU20 258 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 PLEKHF2Q9H8W4 249 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 NKX2-6A6NCS4 301 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 TNFSF4P23510 183 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 LIAT1Q6ZQX7 453 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 FAM57BQ71RH2 274 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 STARD4Q96DR4 205 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 ATP5SQ99766 215 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 NUDT16L1Q9BRJ7 211 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 OR10A2Q9H208 303 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 LIME1Q9H400 295 aa13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 LYRM2Q9NU23 88 aaPredicted RBP13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 COA3Q9Y2R0 106 aaPredicted RBP13.57□□□□□ -0.24
SEMA3B-214ENST00000619119 DOCK11Q5JSL3 2073 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 MS4A18H0YCH9 400 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 SERF1AO75920 110 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF728P0DKX0 622 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 ADMP35318 185 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 NKX2-1P43699 371 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 COMPP49747 757 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 PLPPR5Q32ZL2 321 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 MS4A18Q3C1V0 323 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 OR5AU1Q8NGC0 362 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 OR5D14Q8NGL3 314 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 TNFRSF14Q92956 283 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 DDIT4LQ96D03 193 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 IMMP1LQ96LU5 166 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 BET1LQ9NYM9 111 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 NPIPA5E9PKD4 350 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 SRSF10O75494 262 aaKnown RBP13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 GOSR1O95249 250 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 CCL3P10147 92 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 MTCP1P56278 107 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 MYBPHQ13203 477 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 ABHD3Q8WU67 409 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 NPIPA1Q9UND3 350 aa13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 CHCHD2Q9Y6H1 151 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-214ENST00000619119 DIRC3C9JPN6 131 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 FFAR4Q5NUL3 377 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF468Q5VIY5 522 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 KCNIP4Q6PIL6 250 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF519Q8TB69 540 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 KCNE4Q8WWG9 221 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 C1orf147Q96MC9 270 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 PLK3Q9H4B4 646 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 LOC102723996A0A087X1L8 192 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 H3BP45 60 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 ISG15P05161 165 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 IGLC2P0DOY2 106 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 IGLC3P0DOY3 106 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 RPL15P61313 204 aaKnown RBP13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 PRDX4Q13162 271 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 H1FNTQ75WM6 255 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 C18orf12Q96KH6 178 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 RYDENQ9NUL5 291 aaKnown RBP13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 CLN8Q9UBY8 286 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 CPAMD8Q8IZJ3 1885 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 KBTBD11O94819 623 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 PLA2G5P39877 138 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 TAS2R30P59541 319 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF726P1Q15940 193 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 OR2M3Q8NG83 312 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 FBXL7Q9UJT9 491 aa13.55□□□□□ -0.24
SEMA3B-214ENST00000619119 TRAV30A0A087WSZ9 112 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 CLEC18AA5D8T8 446 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 HMGB3O15347 200 aaKnown RBP13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 SYNGR4O95473 234 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 TTRP02766 147 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 TYMSP04818 313 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 BMP5P22003 454 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 MSMO1Q15800 293 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 RPS19BP1Q86WX3 136 aaKnown RBP13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 CLEC18CQ8NCF0 446 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 ST6GALNAC3Q8NDV1 305 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 PSMF1Q92530 271 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 MEGF9Q9H1U4 602 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 SLC2A9Q9NRM0 540 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms