RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 DYRK1AQ13627 763 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 HNF4GQ14541 408 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ACTBL2Q562R1 376 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 CT45A1Q5HYN5 189 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 AADACL4Q5VUY2 407 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 OR2T5Q6IEZ7 315 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 FAM131AQ6UXB0 335 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 CPOQ8IVL8 374 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 PRSS35Q8N3Z0 413 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 PARP16Q8N5Y8 322 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 OR10G2Q8NGC3 310 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 OR2T29Q8NH02 315 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 CT45A3Q8NHU0 189 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 NRBF2Q96F24 287 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 NDE1Q9NXR1 346 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 CNOT2Q9NZN8 540 aaKnown RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 TRBV9A0A0B4J1U6 114 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 OR11H12B2RN74 326 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 H0YJX3 145 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 RTL8CO15255 209 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 EPHA2P29317 976 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 SSTR5P35346 364 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 CX3CL1P78423 397 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 TMEM41BQ5BJD5 291 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 SLC16A13Q7RTY0 426 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 GPHB5Q86YW7 130 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 CDH26Q8IXH8 852 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 ARHGAP24Q8N264 748 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 DEFB125Q8N687 156 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 OR13C5Q8NGS8 318 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 SNAPC3Q92966 411 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 CMTM5Q96DZ9 223 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 ADAT3Q96EY9 351 aaPredicted RBP3.4□□□□□ -1.86
SNCA-213ENST00000618500 CLUHP3Q96NS8 147 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 ATP6V0BQ99437 205 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 TSNAXQ99598 290 aaKnown RBP3.4□□□□□ -1.86
SNCA-213ENST00000618500 ADI1Q9BV57 179 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 ANKRD60Q9BZ19 345 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 OR51V1Q9H2C8 321 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 REEP1Q9H902 201 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 GAB2Q9UQC2 676 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 ST3GAL6Q9Y274 331 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 DMRT1Q9Y5R6 373 aa3.4□□□□□ -1.86
SNCA-213ENST00000618500 APOBP04114 4563 aaKnown RBP3.4□□□□□ -1.87
SNCA-213ENST00000618500 A0A0G2JND7 137 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 IZUMO1RA6ND01 250 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 SPINT2O43291 252 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 DEDDO75618 318 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 FADS2O95864 444 aaKnown RBP3.4□□□□□ -1.87
SNCA-213ENST00000618500 MT-ND4P03905 459 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 TRGV3P03979 118 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 BTF3P20290 206 aaKnown RBP3.4□□□□□ -1.87
SNCA-213ENST00000618500 RBM11P57052 281 aaKnown RBP3.4□□□□□ -1.87
SNCA-213ENST00000618500 BNIP1Q12981 228 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 GINS1Q14691 196 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 FAM98BQ52LJ0 330 aaKnown RBP3.4□□□□□ -1.87
SNCA-213ENST00000618500 C12orf73Q69YU5 71 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 CGB2Q6NT52 195 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 PLEKHG7Q6ZR37 379 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 STPG3Q8N7X2 389 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 SUMF2Q8NBJ7 301 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 OR5AN1Q8NGI8 311 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 OR51A2Q8NGJ7 313 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 GIPC3Q8TF64 312 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 MRPS24Q96EL2 167 aaKnown RBP3.4□□□□□ -1.87
SNCA-213ENST00000618500 FAM210BQ96KR6 192 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 ABHD14AQ9BUJ0 271 aa3.4□□□□□ -1.87
SNCA-213ENST00000618500 ANXA8P13928 327 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 ZNF20P17024 532 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 EWSR1Q01844 656 aaKnown RBP eCLIP3.39□□□□□ -1.87
SNCA-213ENST00000618500 LRRC36Q1X8D7 754 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 CD300EQ496F6 205 aaPredicted RBP3.39□□□□□ -1.87
SNCA-213ENST00000618500 MORN2Q502X0 79 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 ATAD3CQ5T2N8 411 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 FAM53AQ6NSI3 398 aaPredicted RBP3.39□□□□□ -1.87
SNCA-213ENST00000618500 Q6ZR54 194 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 NR2C2APQ86WQ0 139 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 PDPNQ86YL7 162 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 OR2C3Q8N628 320 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.39□□□□□ -1.87
SNCA-213ENST00000618500 BBS1Q8NFJ9 593 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 LEAP2Q969E1 77 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 NIPSNAP1Q9BPW8 284 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 PIPOXQ9P0Z9 390 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 IKZF2Q9UKS7 526 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 WASHC3Q9Y3C0 194 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 IGHV3-72A0A0B4J1Y9 119 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 C2orf70A6NJV1 201 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 SHOXO15266 292 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 SLC31A2O15432 143 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 ZNF780AO75290 641 aaPredicted RBP3.39□□□□□ -1.87
SNCA-213ENST00000618500 SOX14O95416 240 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 IFNA4P05014 189 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 DUSP1P28562 367 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 SUMO1P63165 101 aaKnown RBP3.39□□□□□ -1.87
SNCA-213ENST00000618500 HMGN3Q15651 99 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 CDPF1Q6NVV7 123 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 UNQ5815/PRO19632Q6UWF5 114 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 HAPLN4Q86UW8 402 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms