RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 COL4A6Q14031 1691 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 TRAV30A0A087WSZ9 112 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 SIRPB1O00241 398 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 ZNF253O75346 499 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 UTS2O95399 124 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 C1QTNF9P0C862 333 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 CRYBA4P53673 196 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 TCL1AP56279 114 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 SPANXN5Q5MJ07 72 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 SLC38A9Q8NBW4 561 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 OR4D5Q8NGN0 318 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 OR1K1Q8NGR3 316 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 MED29Q9NX70 200 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 MSRB2Q9Y3D2 182 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 UBE2L5PA0A1B0GUS4 154 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 G3V3Y1 287 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 LINC01565O15544 149 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 PITX3O75364 302 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 BGLAPP02818 100 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 TMEM187Q14656 261 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 MRGPRGQ86SM5 289 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 H1FOOQ8IZA3 346 aaPredicted RBP10.6□□□□□ -0.71
MATR3-227ENST00000618441 MRPL18Q9H0U6 180 aaKnown RBP10.6□□□□□ -0.71
MATR3-227ENST00000618441 NAT8BQ9UHF3 227 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 SLC45A2Q9UMX9 530 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 ST3GAL6Q9Y274 331 aa10.6□□□□□ -0.71
MATR3-227ENST00000618441 MYO7BQ6PIF6 2116 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 DPRXA6NFQ7 191 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 HSPB6O14558 160 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 HS3ST1O14792 307 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 KBTBD11O94819 623 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 EPHA8P29322 1005 aaPredicted RBP10.59□□□□□ -0.71
MATR3-227ENST00000618441 MPLP40238 635 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 LHX2P50458 406 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 DLX2Q07687 328 aaPredicted RBP10.59□□□□□ -0.71
MATR3-227ENST00000618441 STUMQ69YW2 141 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 ZNF841Q6ZN19 808 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 STPG3Q8N7X2 389 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 RERGQ96A58 199 aaPredicted RBP10.59□□□□□ -0.71
MATR3-227ENST00000618441 TMEM186Q96B77 213 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 WDYHV1Q96HA8 205 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 NRN1Q9NPD7 142 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 G6PC2Q9NQR9 355 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 DAPP1Q9UN19 280 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 IGKV1D-42A0A075B6H8 117 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 OTOL1A6NHN0 477 aaPredicted RBP10.59□□□□□ -0.71
MATR3-227ENST00000618441 GPR75O95800 540 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 CYP2G1PQ6ZSU1 146 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 C1orf174Q8IYL3 243 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 OR51H1Q8NH63 302 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 LINC00615Q96LM1 132 aaPredicted RBP10.59□□□□□ -0.71
MATR3-227ENST00000618441 RPP25Q9BUL9 199 aaKnown RBP10.59□□□□□ -0.71
MATR3-227ENST00000618441 ZNF106Q9H2Y7 1883 aaKnown RBP10.59□□□□□ -0.71
MATR3-227ENST00000618441 SPTA1P02549 2419 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 F5H5K5 113 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 PNMTP11086 282 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 TNFRSF1AP19438 455 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 ZNF83P51522 516 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 RAB30Q15771 203 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 KIAA0895LQ68EN5 471 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 THAP10Q9P2Z0 257 aaPredicted RBP10.59□□□□□ -0.71
MATR3-227ENST00000618441 RNF114Q9Y508 228 aa10.59□□□□□ -0.71
MATR3-227ENST00000618441 TRPM6Q9BX84 2022 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 CFIP05156 583 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 AADACP22760 399 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 LHFPL1Q86WI0 220 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 SPIN2AQ99865 258 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 SPIN2BQ9BPZ2 258 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 CHRDL1Q9BU40 450 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 FNDC4Q9H6D8 234 aaPredicted RBP10.58□□□□□ -0.72
MATR3-227ENST00000618441 ZNF442Q9H7R0 627 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 DEC1Q9P2X7 70 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 ONECUT1Q9UBC0 465 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 TRAV26-1A0A087WT03 109 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 GAGE10A6NGK3 116 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 TMEM14DPA8MWL7 114 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 H0YIG0 161 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 SLC17A3O00476 420 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 CTXN2P0C2S0 81 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 FAM186AA6NE01 2351 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 IGLON5A6NGN9 336 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 GJE1A6NN92 205 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 HLA-DOBP13765 273 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 MDH2P40926 338 aaKnown RBP10.58□□□□□ -0.72
MATR3-227ENST00000618441 PSG6Q00889 435 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 CD226Q15762 336 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 PRTGQ2VWP7 1150 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 HLA-DRB5Q30154 266 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 MAFAQ8NHW3 353 aaPredicted RBP10.58□□□□□ -0.72
MATR3-227ENST00000618441 SARAFQ96BY9 339 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 CLCF1Q9UBD9 225 aa10.58□□□□□ -0.72
MATR3-227ENST00000618441 TCF20Q9UGU0 1960 aaKnown RBP10.57□□□□□ -0.72
MATR3-227ENST00000618441 NPIPB7O75200 414 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 CCDC71LQ8N9Z2 235 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 OR10V1Q8NGI7 309 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 TMEM234Q8WY98 164 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 DNASE2BQ8WZ79 361 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 UHRF2Q96PU4 802 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 NECAP2Q9NVZ3 263 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 ANXA10Q9UJ72 324 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms