RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 IGKV1-13P0DP09 117 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 ECI1P42126 302 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 ZNF134P52741 427 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 UCP3P55916 312 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 PAX8Q06710 450 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 SURF2Q15527 256 aaPredicted RBP6.6□□□□□ -1.35
TARDBP-219ENST00000617757 TRIM16LQ309B1 348 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 Q3ZCU0 254 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 CENPSQ8N2Z9 138 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 ZDHHC22Q8N966 263 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 LINC01356Q8N9X3 169 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 MINDY2Q8NBR6 621 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 EDARADDQ8WWZ3 215 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 LEAP2Q969E1 77 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 TOMM40LQ969M1 308 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 UPRTQ96BW1 309 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 SUCNR1Q9BXA5 334 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 SIRPDQ9H106 197 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 C20orf85Q9H1P6 137 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 MMP28Q9H239 520 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 GPR132Q9UNW8 380 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 FLVCR2Q9UPI3 526 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 PSG11Q9UQ72 335 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 VSIG4Q9Y279 399 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 NUBP2Q9Y5Y2 271 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 KPTNQ9Y664 436 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 ZFHX3Q15911 3703 aa6.6□□□□□ -1.35
TARDBP-219ENST00000617757 A0A1W2PPE3 182 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 SLC31A2O15432 143 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 ST8SIA5O15466 376 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 TOX4O94842 621 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 MSMBP08118 114 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 H2AFB2P0C5Z0 115 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 OR8U9P0C7N5 309 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 MMP9P14780 707 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 PRTN3P24158 256 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 CD34P28906 385 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 GNRHRP30968 328 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 GNG10P50151 68 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 LUMP51884 338 aaPredicted RBP6.59□□□□□ -1.35
TARDBP-219ENST00000617757 DLX1P56177 255 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 BAMBIQ13145 260 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 TMEM249Q2WGJ8 235 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 CT45A1Q5HYN5 189 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 METTL11BQ5VVY1 283 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 HCP5Q6MZN7 132 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 LPCAT3Q6P1A2 487 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 PLET1Q6UQ28 207 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 BTNL3Q6UXE8 466 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 SLC25A48Q6ZT89 311 aaKnown RBP6.59□□□□□ -1.35
TARDBP-219ENST00000617757 VMO1Q7Z5L0 202 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 LINC00311Q8N616 119 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 C8orf31Q8N9H6 132 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 OR2AK2Q8NG84 335 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 OR8U1Q8NH10 309 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 OR9G1Q8NH87 305 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 CT45A3Q8NHU0 189 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 ZNF596Q8TC21 504 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 ZFAND1Q8TCF1 268 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 SECTM1Q8WVN6 248 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 CREB3L1Q96BA8 519 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 MSI2Q96DH6 328 aaKnown RBP6.59□□□□□ -1.35
TARDBP-219ENST00000617757 SCGB3A2Q96PL1 93 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 AGMATQ9BSE5 352 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 RTBDNQ9BSG5 229 aaPredicted RBP6.59□□□□□ -1.35
TARDBP-219ENST00000617757 MARVELD1Q9BSK0 173 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 ABHD14AQ9BUJ0 271 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 RSRP1Q9BUV0 290 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 SLC5A7Q9GZV3 580 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 C5orf66Q9H5L9 145 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 UNKLQ9H9P5 680 aaKnown RBP6.59□□□□□ -1.35
TARDBP-219ENST00000617757 CCL28Q9NRJ3 127 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 NUDT15Q9NV35 164 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 ITGB1BP2Q9UKP3 347 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 RNF150Q9ULK6 438 aa6.59□□□□□ -1.35
TARDBP-219ENST00000617757 RBM7Q9Y580 266 aaKnown RBP6.59□□□□□ -1.35
TARDBP-219ENST00000617757 SVEP1Q4LDE5 3571 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 IGHV2-26A0A0B4J1V2 119 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 TRAV20A0A0B4J274 112 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 INMT-MINDY4F8WBC2 141 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 J3QR06 171 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 HSD17B6O14756 317 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 IGLV2-14P01704 120 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 RLN1P04808 185 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 CTSDP07339 412 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-219ENST00000617757 IGHV4-31P0DP07 118 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 PGAM2P15259 253 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 PI3P19957 117 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 GZMKP49863 264 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 RAB7AP51149 207 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 MECP2P51608 486 aaKnown RBP6.58□□□□□ -1.36
TARDBP-219ENST00000617757 RAG2P55895 527 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 PRB3Q04118 309 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-219ENST00000617757 DCAF12L2Q5VW00 463 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 Q6ZNX1 250 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 ZNF818PQ6ZRF7 136 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 ODF3L1Q8IXM7 274 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 SLC38A6Q8IZM9 456 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 ABHD12Q8N2K0 398 aa6.58□□□□□ -1.36
TARDBP-219ENST00000617757 CIARTQ8N365 385 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms