RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 SPRY4Q9C004 299 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 GAB2Q9UQC2 676 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 MYO18BQ8IUG5 2567 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 hCG_38984A0A1B0GV85 526 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 CD300LBA8K4G0 201 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 GPR137BO60478 399 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 SCGNO76038 276 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 FUT3P21217 361 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 ATP6V0CP27449 155 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 STRAPQ9Y3F4 350 aaKnown RBP12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 ZNF25P17030 456 aaPredicted RBP12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 FUT6P51993 359 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 WDR25Q64LD2 544 aaPredicted RBP12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 ZNF826PQ6ZT77 177 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 OR51H1Q8NH63 302 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 SCNM1Q9BWG6 230 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 DOCK11Q5JSL3 2073 aa12.36□□□□□ -0.43
SHROOM1-208ENST00000617339 ZFP92A6NM28 416 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 ALDH3B1P43353 468 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 RBMXL1Q96E39 390 aaKnown RBP12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 GINS3Q9BRX5 216 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 GNG13Q9P2W3 67 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 TACC2O95359 2948 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 TRGV8A0A0C4DH27 118 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 IFNL4K9M1U5 179 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 M0R1B8 84 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 CDIPTO14735 213 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 GFRA3O60609 400 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 TPRX1Q8N7U7 411 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 KDF1Q8NAX2 398 aaPredicted RBP12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 SPSB1Q96BD6 273 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 ARHGAP21Q5T5U3 1957 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 SERPINE3A8MV23 424 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 VWA1Q6PCB0 445 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 ZDHHC23Q8IYP9 409 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 C2orf88Q9BSF0 95 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 MRPL37Q9BZE1 423 aaKnown RBP12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 MSL2Q9HCI7 577 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 CBLN4Q9NTU7 201 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 MTCH1Q9NZJ7 389 aa12.35□□□□□ -0.43
SHROOM1-208ENST00000617339 MSTNO14793 375 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 AADACP22760 399 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 CTSSP25774 331 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 GABRA2P47869 451 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 LHFPL2Q6ZUX7 228 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 WFDC8Q8IUA0 241 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 C1orf87Q8N0U7 546 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 NEU1Q99519 415 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 COL5A1P20908 1838 aaPredicted RBP12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 KIAA1549Q9HCM3 1950 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 ELOA3CA0A087WX78 387 aaPredicted RBP12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 GNRHRP30968 328 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 EDDM3AQ14507 147 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 RNF150Q9ULK6 438 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 K7N7A8 449 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 FGF7P21781 194 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 FOXF2Q12947 444 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 GNMTQ14749 295 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 FAM53AQ6NSI3 398 aaPredicted RBP12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 LFNGQ8NES3 379 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 SIRT7Q9NRC8 400 aa12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 UBE2J1Q9Y385 318 aaPredicted RBP12.34□□□□□ -0.43
SHROOM1-208ENST00000617339 ST8SIA3O43173 380 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 NXPH2O95156 264 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 NUTF2P61970 127 aaKnown RBP12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 HIST1H3AP68431 136 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 TBC1D28Q2M2D7 210 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 SLC25A24Q6NUK1 477 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 FGF23Q9GZV9 251 aaPredicted RBP12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 PROCRQ9UNN8 238 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 H3BP45 60 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 IL18BPO95998 194 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 CYC1P08574 325 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 WNT5AP41221 380 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 FAM89BQ8N5H3 189 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 NECAP2Q9NVZ3 263 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 TUBD1Q9UJT1 453 aa12.33□□□□□ -0.44
SHROOM1-208ENST00000617339 A8MWP6 167 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 SSSCA1O60232 199 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 GZMBP10144 247 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 GLIPR1P48060 266 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 GFRALQ6UXV0 394 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 ASCL5Q7RTU5 278 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 CABLES2Q9BTV7 478 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 ZNF286AQ9HBT8 521 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 TMED3Q9Y3Q3 217 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 PRR33A8MZF0 331 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 ICAM4Q14773 271 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 PPA1Q15181 289 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 OPN3Q9H1Y3 402 aaPredicted RBP12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 A6NNC1 897 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 TNFSF10P50591 281 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 FGF8P55075 233 aaPredicted RBP12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 RPS16P62249 146 aaKnown RBP12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 TNFRSF9Q07011 255 aa12.32□□□□□ -0.44
SHROOM1-208ENST00000617339 RIPPLY2Q5TAB7 128 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms