RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 RNPS1Q15287 305 aaKnown RBP9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 DEFB109BQ30KR1 87 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 CHRFAM7AQ494W8 412 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 NRN1LQ496H8 165 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 LHFPL1Q86WI0 220 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 LFNGQ8NES3 379 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 OR4X1Q8NH49 305 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 GINS3Q9BRX5 216 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 ABHD14AQ9BUJ0 271 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 SHANK1Q9Y566 2161 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 LYZL6O75951 148 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 DUSP1P28562 367 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 FUT6P51993 359 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 ETFRF1Q6IPR1 90 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 MRPL21Q7Z2W9 205 aaKnown RBP9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 MDP1Q86V88 176 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 FAM185AQ8N0U4 392 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 OSR2Q8N2R0 312 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZNF488Q96MN9 340 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 SLC7A11Q9UPY5 501 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 CACNA1AO00555 2505 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 A0A1B0GW64 132 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 OR7C1O76099 320 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 MBPP02686 304 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 BCL3P20749 454 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 EPHA1P21709 976 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 RBMXP38159 391 aaKnown RBP9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 P2RY1P47900 373 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 ASCL1P50553 236 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZNF880Q6PDB4 577 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZNF573Q86YE8 665 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 C17orf78Q8N4C9 275 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 OR1K1Q8NGR3 316 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 TRIB1Q96RU8 372 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZNF2Q9BSG1 426 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 XKRY2A2RUG3 117 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZNF891A8MT65 544 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 SIAH2O43255 324 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 SELEP16581 610 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 ERVS71-1P61550 626 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 COL10A1Q03692 680 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 FBXW9Q5XUX1 488 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 SMDT1Q9H4I9 107 aa9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 ANKRD11Q6UB99 2663 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA9-202ENST00000616887 SYNGR1O43759 233 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 OR5AC1P0C628 307 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 GLI4P10075 376 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 IRF2P14316 349 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 FPR2P25090 351 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 BATFQ16520 125 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 ASCL4Q6XD76 172 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 MRPL41Q8IXM3 137 aaKnown RBP9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 TOMM40LQ969M1 308 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 LPAR2Q9HBW0 351 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 ANXA10Q9UJ72 324 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZNF391Q9UJN7 358 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 WSB1Q9Y6I7 421 aa9.71□□□□□ -0.85
PCDHGA9-202ENST00000616887 TMEM210A6NLX4 147 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 K7N7A8 449 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 IFNL4K9M1U5 179 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 M0QZK8 103 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 HSPA12AO43301 675 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 GGCTO75223 188 aaKnown RBP9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 SCGB1D1O95968 90 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 PTGER4P35408 488 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 RBM11P57052 281 aaKnown RBP9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 TAS2R46P59540 309 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 PMS2P11Q13670 270 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 FAM189A2Q15884 450 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 P4HA3Q7Z4N8 544 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 SGPP2Q8IWX5 399 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 RNASE8Q8TDE3 154 aaKnown RBP9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 APOBEC3DQ96AK3 386 aaPredicted RBP9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 HIST1H2AAQ96QV6 131 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 CEP295Q9C0D2 2601 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 NCOR2Q9Y618 2525 aa9.71□□□□□ -0.86
PCDHGA9-202ENST00000616887 ZNF732B4DXR9 585 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 SS18L1O75177 396 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 IGHV1-2P23083 117 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 FXYD4P59646 89 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 RBX1P62877 108 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 HLA-DRB3P79483 266 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 HOXA4Q00056 320 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 OR5I1Q13606 314 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 P2RY6Q15077 328 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 IQCJQ1A5X6 159 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 VWA1Q6PCB0 445 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 CNEP1R1Q8N9A8 125 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 BCL2L2Q92843 193 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 MTCH1Q9NZJ7 389 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 ADGRG4Q8IZF6 3080 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 RELNP78509 3460 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 PIEZO2Q9H5I5 2752 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 CD300LBA8K4G0 201 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 CEACAM18A8MTB9 384 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 CLDN34H7C241 214 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 IDH3GP51553 393 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 PLP2Q04941 152 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms