RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 M0R296 226 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 IGHV3-43DP0DP04 118 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 NDUFB7P17568 137 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 PMELP40967 661 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 NDUFA6P56556 154 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 NSUN5P2Q63ZY6 315 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 GGNQ86UU5 652 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF429Q86V71 674 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 WDFY1Q8IWB7 410 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 LINC00470Q9BZP3 86 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 GAB2Q9UQC2 676 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 V9GYS6 101 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 IGKV1-27A0A075B6S5 117 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 C3orf80F5H4A9 247 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 ID3Q02535 119 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 GLRX5Q86SX6 157 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR4A16Q8NH70 328 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 LRRC29Q8WV35 223 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 MARS2Q96GW9 593 aaKnown RBP4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 GRAMD2BQ96HH9 432 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 S1PR3Q99500 378 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 PLEKHA3Q9HB20 300 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 A0A1B0GU03 582 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 DNASE2O00115 360 aaPredicted RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 MMP7P09237 267 aaPredicted RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 DANCRP0C864 163 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM42Q69YG0 159 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 INO80CQ6PI98 192 aaPredicted RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 ETV3LQ6ZN32 361 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 RAB39BQ96DA2 213 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 MSI2Q96DH6 328 aaKnown RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 CYYR1Q96J86 154 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 PKIBQ9C010 78 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR2D2Q9H210 308 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR51I2Q9H344 312 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 DYNLRB1Q9NP97 96 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 IL36GQ9NZH8 169 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 FOXJ2Q9P0K8 574 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 COL4A3Q01955 1670 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 VPS13AQ96RL7 3174 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 IGKV1D-13A0A0B4J2D9 117 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 IGKV1-13P0DP09 117 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 PSG2P11465 335 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 RAB5AP20339 215 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 GFRA1P56159 465 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 RNF212Q495C1 297 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF818PQ6ZRF7 136 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR2Z1Q8NG97 314 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 RSG1Q9BU20 258 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 SMDT1Q9H4I9 107 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 SLC35D1Q9NTN3 355 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF581Q9P0T4 197 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 IGKV3D-15A0A087WSY6 115 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 ACP1P24666 158 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF83P51522 516 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 RPS23P62266 143 aaKnown RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 SRSF4Q08170 494 aaKnown RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 USF2Q15853 346 aaPredicted RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 FGFRL1Q8N441 504 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 CYB561D1Q8N8Q1 229 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 LRTM2Q8N967 370 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 RNF138Q8WVD3 245 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 SMIM8Q96KF7 97 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR4C12Q96R67 309 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 LY6G6EA0A0G2JKS1 128 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 PRRG2O14669 202 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 FCGR3BO75015 233 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 RHBDL1O75783 438 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 EIF3GO75821 320 aaKnown RBP eCLIP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 NTF4P34130 210 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 CD200P41217 278 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 P2RY6Q15077 328 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 PDZD11Q5EBL8 140 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 GMPPAQ96IJ6 420 aaPredicted RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 CARHSP1Q9Y2V2 147 aaKnown RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 U3KQA8 63 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 H0YL77 283 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 PGLYRP1O75594 196 aaPredicted RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 NAPSAO96009 420 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 DYNLT3P51808 116 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 UCP2P55851 309 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 CLDN18P56856 261 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 S100A12P80511 92 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 AESQ08117 197 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 NANPQ8TBE9 248 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 DTD1Q8TEA8 209 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 GTF3AQ92664 365 aaKnown RBP4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 RAB24Q969Q5 203 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 GPR146Q96CH1 333 aa4.82□□□□□ -1.64
SYNCRIP-204ENST00000616122 PINLYPA6NC86 204 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 H3BQ15 152 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 KLK10O43240 276 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 FAM157CP0CG43 387 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 RND3P61587 244 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 SERF2P84101 59 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 BTNL8Q6UX41 500 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 C1orf87Q8N0U7 546 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR1K1Q8NGR3 316 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM45BQ96B21 275 aa4.81□□□□□ -1.64
SYNCRIP-204ENST00000616122 BOD1Q96IK1 185 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms