RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 STRCQ7RTU9 1775 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 SYNGR1O43759 233 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 SCTP09683 121 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 NUDT16L1Q9BRJ7 211 aaKnown RBP16.36■□□□□ 0.21
SPAST-203ENST00000615843 TINAGQ9UJW2 476 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 MPDU1O75352 247 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 ZXDCQ2QGD7 858 aaPredicted RBP16.36■□□□□ 0.21
SPAST-203ENST00000615843 DOLPP1Q86YN1 238 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 ZNF385AQ96PM9 386 aaKnown RBP16.36■□□□□ 0.21
SPAST-203ENST00000615843 CDC42EP3Q9UKI2 254 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 GLI3P10071 1580 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 RP1L1Q8IWN7 2480 aaPredicted RBP16.36■□□□□ 0.21
SPAST-203ENST00000615843 C2CD4DB7Z1M9 353 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 TNFSF15O95150 251 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 FABP2P12104 132 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 MNX1P50219 401 aaPredicted RBP16.35■□□□□ 0.21
SPAST-203ENST00000615843 CRYBA2P53672 197 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 TCTAP57738 103 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 TNFAIP6P98066 277 aaPredicted RBP16.35■□□□□ 0.21
SPAST-203ENST00000615843 ZDHHC8Q9ULC8 765 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 SCN3AQ9NY46 2000 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 PTPRFP10586 1907 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 GPR146Q96CH1 333 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 TUSC5Q8IXB3 177 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 PARLQ9H300 379 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 KLF3P57682 345 aaPredicted RBP16.35■□□□□ 0.21
SPAST-203ENST00000615843 HERVK_113P61574 105 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 ZNF506Q5JVG8 444 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 ZNF488Q96MN9 340 aa16.35■□□□□ 0.21
SPAST-203ENST00000615843 RNF222A6NCQ9 220 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 KBTBD11O94819 623 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 BTCP35070 178 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 GNB2P62879 340 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 SLC25A34Q6PIV7 304 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 GRIFINA4D1Z8 144 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 H3BVH4 76 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 HOXA5P20719 270 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 AESQ08117 197 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 TEX30Q5JUR7 227 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 KCNK17Q96T54 332 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 IL36RNQ9UBH0 155 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 TRPM6Q9BX84 2022 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 CCDC88CQ9P219 2028 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 OR4C46A6NHA9 309 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 M0R296 226 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 TRA2AQ13595 282 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPAST-203ENST00000615843 HES3Q5TGS1 186 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 A8MWL6 223 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 TMEM187Q14656 261 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 FAM27BQ5VT28 67 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 PAXXQ9BUH6 204 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 AP5S1Q9NUS5 200 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 FAM206AQ9NX38 181 aa16.34■□□□□ 0.21
SPAST-203ENST00000615843 PGLYRP1O75594 196 aaPredicted RBP16.33■□□□□ 0.21
SPAST-203ENST00000615843 CTAG1AP78358 180 aa16.33■□□□□ 0.21
SPAST-203ENST00000615843 GAB4Q2WGN9 574 aa16.33■□□□□ 0.21
SPAST-203ENST00000615843 OR1L1Q8NH94 360 aa16.33■□□□□ 0.21
SPAST-203ENST00000615843 SLC25A33Q9BSK2 321 aa16.33■□□□□ 0.21
SPAST-203ENST00000615843 THYN1Q9P016 225 aa16.33■□□□□ 0.21
SPAST-203ENST00000615843 FOXJ2Q9P0K8 574 aa16.33■□□□□ 0.21
SPAST-203ENST00000615843 ORM1P02763 201 aa16.33■□□□□ 0.21
SPAST-203ENST00000615843 RELBQ01201 579 aa16.33■□□□□ 0.21
SPAST-203ENST00000615843 MRPL37Q9BZE1 423 aaKnown RBP16.33■□□□□ 0.21
SPAST-203ENST00000615843 CLEC5AQ9NY25 188 aa16.33■□□□□ 0.21
SPAST-203ENST00000615843 J3QR06 171 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 CD40P25942 277 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 FGF12P61328 243 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 OR10S1Q8NGN2 331 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 SOSTQ9BQB4 213 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 G6PC2Q9NQR9 355 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 TRAV14DV4A0A0A6YYC5 116 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 LEPROTL1O95214 131 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 FAM216AQ8WUB2 273 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 ONECUT1Q9UBC0 465 aa16.33■□□□□ 0.2
SPAST-203ENST00000615843 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.32■□□□□ 0.2
SPAST-203ENST00000615843 TRAV38-1A0A0B4J264 116 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 TMEM14DPA8MWL7 114 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 SPINT1O43278 529 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 RBM14Q96PK6 669 aaKnown RBP16.32■□□□□ 0.2
SPAST-203ENST00000615843 SRIP30626 198 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 QTRT1Q9BXR0 403 aaKnown RBP16.32■□□□□ 0.2
SPAST-203ENST00000615843 AMY1AP04745 511 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 MYOZ3Q8TDC0 251 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 HPRT1P00492 218 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 CCL3P10147 92 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 NXPH1P58417 271 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 RPL30P62888 115 aaKnown RBP16.32■□□□□ 0.2
SPAST-203ENST00000615843 GBGT1Q8N5D6 347 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 KLF4O43474 513 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 PRRX1P54821 245 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 SMIM8Q96KF7 97 aa16.32■□□□□ 0.2
SPAST-203ENST00000615843 DMRTA1Q5VZB9 504 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 TGIF2LYQ8IUE0 185 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 SMIM12Q96EX1 92 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 GPHA2Q96T91 129 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 C4orf51C9J302 202 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 DEFB109BQ30KR1 87 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 WDR74Q6RFH5 385 aaPredicted RBP16.31■□□□□ 0.2
SPAST-203ENST00000615843 GLRX5Q86SX6 157 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 HARBI1Q96MB7 349 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms