RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 E5RGE8 158 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 ELLP55199 621 aaPredicted RBP11.19□□□□□ -0.62
FOXN3-219ENST00000615335 BATFQ16520 125 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 CYB561D1Q8N8Q1 229 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 C1orf147Q96MC9 270 aaPredicted RBP11.19□□□□□ -0.62
FOXN3-219ENST00000615335 GPER1Q99527 375 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 GPR35Q9HC97 309 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 ZNF319Q9P2F9 582 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 NSG2Q9Y328 171 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 CBY3A6NI87 242 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 RER1O15258 196 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 GPR137BO60478 399 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 MBPP02686 304 aaPredicted RBP11.19□□□□□ -0.62
FOXN3-219ENST00000615335 ICAM4Q14773 271 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 RNPS1Q15287 305 aaKnown RBP11.19□□□□□ -0.62
FOXN3-219ENST00000615335 FAM189A2Q15884 450 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 TMEM183BQ1AE95 376 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 IAH1Q2TAA2 248 aaPredicted RBP11.19□□□□□ -0.62
FOXN3-219ENST00000615335 ZIC4Q8N9L1 334 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 RBMXL1Q96E39 390 aaKnown RBP11.19□□□□□ -0.62
FOXN3-219ENST00000615335 PYGO2Q9BRQ0 406 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 CSTL1Q9H114 145 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 SMG1Q96Q15 3661 aaKnown RBP11.19□□□□□ -0.62
FOXN3-219ENST00000615335 EPG5Q9HCE0 2579 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 MED12LQ86YW9 2145 aa11.19□□□□□ -0.62
FOXN3-219ENST00000615335 ZNF705FA8MVS1 300 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-219ENST00000615335 AHRRA9YTQ3 701 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 TOMM40O96008 361 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 ZNF705DP0CH99 300 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-219ENST00000615335 ZNF705BP0CI00 300 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-219ENST00000615335 FCGR2AP12318 317 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 TMEM50BP56557 158 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 SUPT4H1P63272 117 aaKnown RBP11.18□□□□□ -0.62
FOXN3-219ENST00000615335 ARFRP1Q13795 201 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 PCSK4Q6UW60 755 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 GFRALQ6UXV0 394 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 FAM57BQ71RH2 274 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 DOK3Q7L591 496 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 TUSC5Q8IXB3 177 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 OR5H2Q8NGV7 314 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 ERGIC1Q969X5 290 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 VPS25Q9BRG1 176 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 CALHM2Q9HA72 323 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 C1orf123Q9NWV4 160 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 RAD51DO75771 328 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 C1QL1O75973 258 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 CCL1P22362 96 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 FAM3BP58499 235 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-219ENST00000615335 ZNF66Q6ZN08 573 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 TMEM182Q6ZP80 229 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-219ENST00000615335 TNFRSF14Q92956 283 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 ARHGAP5-AS1Q96IT6 56 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 TBX15Q96SF7 602 aa11.18□□□□□ -0.62
FOXN3-219ENST00000615335 PNRC2Q9NPJ4 139 aaKnown RBP11.18□□□□□ -0.62
FOXN3-219ENST00000615335 IGKV3D-15A0A087WSY6 115 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 A0A1W2PP11 408 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 AMY2BP19961 511 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 NTF4P34130 210 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 AAED1Q7RTV5 226 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 IMMP2LQ96T52 175 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 RBKSQ9H477 322 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 COL6A6A6NMZ7 2263 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 FAM230AA0A1W2PPH8 454 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 MRPL33O75394 65 aaKnown RBP11.17□□□□□ -0.62
FOXN3-219ENST00000615335 ANOS1P23352 680 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 GRB2P62993 217 aaKnown RBP11.17□□□□□ -0.62
FOXN3-219ENST00000615335 P2RY6Q15077 328 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 ACSF3Q4G176 576 aaPredicted RBP11.17□□□□□ -0.62
FOXN3-219ENST00000615335 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 TEX43Q6ZNM6 134 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 LINC01551Q86U37 167 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 MOB3AQ96BX8 217 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 OR10A2Q9H208 303 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 CLCF1Q9UBD9 225 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 KALRNO60229 2985 aa11.17□□□□□ -0.62
FOXN3-219ENST00000615335 A0A1B0GV50 99 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 CLEC18AA5D8T8 446 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 IFNA21P01568 189 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 HBE1P02100 147 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 PI3P19957 117 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 CSNK1A1P48729 337 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 UBE2G2P60604 165 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 TMEM123Q8N131 208 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 CLEC18CQ8NCF0 446 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 OR51T1Q8NGJ9 327 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 FAM57AQ8TBR7 257 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 ST6GALNAC5Q9BVH7 336 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
FOXN3-219ENST00000615335 FREM1Q5H8C1 2179 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 DOCK7Q96N67 2140 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 IGKV1-9A0A0C4DH69 117 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 PRRG2O14669 202 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 WDR1O75083 606 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 KNG1P01042 644 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 RBMXP38159 391 aaKnown RBP11.16□□□□□ -0.62
FOXN3-219ENST00000615335 TFPI2P48307 235 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 RPS20P60866 119 aaKnown RBP11.16□□□□□ -0.62
FOXN3-219ENST00000615335 RPL19P84098 196 aaKnown RBP11.16□□□□□ -0.62
FOXN3-219ENST00000615335 HIST3H3Q16695 136 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms