RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 V9GYH0 126 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 TCL1AP56279 114 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 MFSD2BA6NFX1 497 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 ADAM11O75078 769 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 COX5BP10606 129 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 MMD2Q8IY49 270 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 ZNF645Q8N7E2 425 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 CDRT15L2A8MXV6 281 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 PRSS1P07477 247 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 CSN3P07498 182 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 SRSF10O75494 262 aaKnown RBP17.42■□□□□ 0.38
CTDP1-208ENST00000613122 ARF6P62330 175 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 LPAR5Q9H1C0 372 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 MIXL1Q9H2W2 232 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 CEBPDP49716 269 aaPredicted RBP17.42■□□□□ 0.38
CTDP1-208ENST00000613122 LY6EQ16553 131 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 LRRC75BQ2VPJ9 315 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 TOMM20LQ6UXN7 152 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 RFLNBQ8N5W9 214 aa17.42■□□□□ 0.38
CTDP1-208ENST00000613122 CORTO00230 105 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 PNRC1Q12796 327 aaPredicted RBP17.41■□□□□ 0.38
CTDP1-208ENST00000613122 CALYQ9NYX4 217 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 VAX2Q9UIW0 290 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 IGLV1-36A0A0B4J1U3 117 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 HELTA6NFD8 242 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 C1QCP02747 245 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 RPL7P18124 248 aaKnown RBP17.41■□□□□ 0.38
CTDP1-208ENST00000613122 FAM210BQ96KR6 192 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 PARD6AQ9NPB6 346 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 A1L4Q6 167 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 CEACAM18A8MTB9 384 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 IGSF11Q5DX21 431 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 ANAPC16Q96DE5 110 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 MYO16Q9Y6X6 1858 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 J3QR89 54 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 PDE6DO43924 150 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 FOXH1O75593 365 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 SCO1O75880 301 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 TMEM255AQ5JRV8 349 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 EAF1Q96JC9 268 aaPredicted RBP17.41■□□□□ 0.38
CTDP1-208ENST00000613122 VAMP3Q15836 100 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 C16orf92Q96LL3 132 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 PAXXQ9BUH6 204 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 SIRT7Q9NRC8 400 aa17.41■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A10PA6NDY2 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A18PA6NE21 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A16PA6NEW6 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A20PA6NIJ5 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A8PA6NJQ4 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A7PA6NKC0 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A22PA8MWA6 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A12PA8MX19 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A5PA8MXJ8 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A23PA8MXZ1 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 SS18L1O75177 396 aaPredicted RBP17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A15PP0C7V4 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A13PP0C7W8 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A14PP0C7W9 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 FAM90A24PP0C7X0 464 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 ODAMA1E959 279 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 AREGP15514 252 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 LTBRP36941 435 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 HNRNPA3P51991 378 aaKnown RBP17.4■□□□□ 0.38
CTDP1-208ENST00000613122 ERVS71-1P61550 626 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 PRSS53Q2L4Q9 553 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 SNAI3Q3KNW1 292 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 SLC25A53Q5H9E4 307 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 IGLV3-21P80748 117 aaPredicted RBP17.4■□□□□ 0.38
CTDP1-208ENST00000613122 RRN3P1Q2M238 152 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 OR10J6PQ8NGY7 276 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 NXF2Q9GZY0 626 aaKnown RBP17.4■□□□□ 0.38
CTDP1-208ENST00000613122 PAGE4O60829 102 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 RPL8P62917 257 aaKnown RBP17.4■□□□□ 0.38
CTDP1-208ENST00000613122 TM4SF20Q53R12 229 aa17.4■□□□□ 0.38
CTDP1-208ENST00000613122 KIR2DL2P43627 348 aaPredicted RBP17.39■□□□□ 0.38
CTDP1-208ENST00000613122 CLRN3Q8NCR9 226 aa17.39■□□□□ 0.38
CTDP1-208ENST00000613122 CHRNA10Q9GZZ6 450 aa17.39■□□□□ 0.38
CTDP1-208ENST00000613122 LHFPL6Q9Y693 200 aa17.39■□□□□ 0.38
CTDP1-208ENST00000613122 RNFT1Q5M7Z0 435 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 LAMTOR1Q6IAA8 161 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 NUP37Q8NFH4 326 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 OR10C1Q96KK4 312 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 CD1BP29016 333 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 APOBEC3AP31941 199 aaPredicted RBP17.39■□□□□ 0.37
CTDP1-208ENST00000613122 SPANXN1Q5VSR9 72 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 TMEM105Q8N8V8 129 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 DCTN5Q9BTE1 182 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 NPVFQ9HCQ7 196 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 BMPR1BO00238 502 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 RHBDL1O75783 438 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 LIPFP07098 398 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 ZNF735P0CB33 412 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 CCKARP32238 428 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 ABHD12Q8N2K0 398 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 ABHD17AQ96GS6 310 aa17.39■□□□□ 0.37
CTDP1-208ENST00000613122 HERVK_113P61574 105 aa17.38■□□□□ 0.37
CTDP1-208ENST00000613122 HCP5Q6MZN7 132 aa17.38■□□□□ 0.37
CTDP1-208ENST00000613122 GBGT1Q8N5D6 347 aa17.38■□□□□ 0.37
CTDP1-208ENST00000613122 SCNM1Q9BWG6 230 aa17.38■□□□□ 0.37
CTDP1-208ENST00000613122 MRPL37Q9BZE1 423 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms