RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 S1PR5Q9H228 398 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 PLXNA4Q9HCM2 1894 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.35□□□□□ -1.711e-6■■■■□ 25.7
VPS13D-213ENST00000613099 SPINK4O60575 86 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 ACTL6BO94805 426 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 C1QTNF9P0C862 333 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF708P17019 499 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 NTHL1P78549 312 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 KIR2DS3Q14952 304 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 OR1K1Q8NGR3 316 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 OR1B1Q8NGR6 318 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 TECRQ9NZ01 308 aaKnown RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 H3BRM9 83 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SYNGR1O43759 233 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 IAPPP10997 89 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 LHX2P50458 406 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 ADAMTSL5Q6ZMM2 481 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 GRAMD2BQ96HH9 432 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SDF2L1Q9HCN8 221 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 EML2O95834 649 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 IL6RP08887 468 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 VIPR2P41587 438 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 CAMPP49913 170 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 CADM4Q8NFZ8 388 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 SLC25A38Q96DW6 304 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 C4orf45Q96LM5 186 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 A8MWV9 139 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 PPIAL4DF5H284 164 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 SERF1AO75920 110 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 BTCP35070 178 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 FUT7Q11130 342 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 PRDX4Q13162 271 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 LRRC75BQ2VPJ9 315 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 MRPS18CQ9Y3D5 142 aaKnown RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 TRAV38-1A0A0B4J264 116 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 PAGE4O60829 102 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 MFSD12Q6NUT3 480 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 OR51H1Q8NH63 302 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 SLC25A43Q8WUT9 341 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 ARHGAP5-AS1Q96IT6 56 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 STRADBQ9C0K7 418 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 OR4C46A6NHA9 309 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 C9orf118A6NHY6 69 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 ETHE1O95571 254 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 CLDN15P56746 228 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 CD46P15529 392 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 OR8B8Q15620 311 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 DEFB134Q4QY38 66 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 OR10J3Q5JRS4 329 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 OR5AS1Q8N127 324 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 KLK6Q92876 244 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 OR8B2Q96RD0 313 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 TBX6O95947 436 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 ASAH2BP0C7U1 165 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 CEACAM8P31997 349 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 OR3A4PP47883 348 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 ATOH7Q8N100 152 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 PP6455Q8WZ26 134 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF775Q96BV0 537 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 AGMATQ9BSE5 352 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 KLF7O75840 302 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 ID4P47928 161 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 H1FNTQ75WM6 255 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF703Q9H7S9 590 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 POLR3KQ9Y2Y1 108 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-213ENST00000613099 PKDREJQ9NTG1 2253 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 A0A0U1RQF3 1178 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 GRIFINA4D1Z8 144 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 PGPEP1LA6NFU8 196 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 NDUFB4O95168 129 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM50BP56557 158 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 PFN3P60673 137 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM116Q8NCL8 245 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 TRAV14DV4A0A0A6YYC5 116 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 PRSS37A4D1T9 235 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 K7EP34 96 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 FUT6P51993 359 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 UCP3P55916 312 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 RBX1P62877 108 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 FOXL1Q12952 345 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM45BQ96B21 275 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 DOCK10Q96BY6 2186 aa4.34□□□□□ -1.71
VPS13D-213ENST00000613099 ANKRD30BLA7E2S9 258 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 OTOSQ8NHW6 89 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 RTL8AQ9BWD3 113 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 PLAGL1Q9UM63 463 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 TSPAN2O60636 221 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 LINC01559Q495D7 138 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 C5orf47Q569G3 176 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 SHISA6Q6ZSJ9 500 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 FAM219AQ8IW50 185 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 MYOZ3Q8TDC0 251 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 WSB2Q9NYS7 404 aaPredicted RBP4.34□□□□□ -1.72
VPS13D-213ENST00000613099 SLC38A8A6NNN8 435 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 P01737 135 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 COA6Q5JTJ3 125 aaKnown RBP4.34□□□□□ -1.72
VPS13D-213ENST00000613099 PPIHO43447 177 aaKnown RBP4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms