RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 ZNF260Q3ZCT1 412 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 CDNFQ49AH0 187 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 SLC25A48Q6ZT89 311 aaKnown RBP9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 IL1F10Q8WWZ1 152 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 TOMM40LQ969M1 308 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 ST6GALNAC6Q969X2 333 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 RPEQ96AT9 228 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 YPEL2Q96QA6 119 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 TSC22D3Q99576 134 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 ABCB10Q9NRK6 738 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 ZNF230Q9UIE0 474 aaPredicted RBP9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 MGAT4AQ9UM21 535 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 DNHD1Q96M86 4753 aa9.1□□□□□ -0.95
CCL3L3-201ENST00000612839 A0A1W2PPI3 338 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 A6NDX4 124 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 TMEM235A6NFC5 223 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 OOSP1A8MZH6 123 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 CHST1O43916 411 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 GSTP1P09211 210 aaKnown RBP9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 ZNF182P17025 639 aaPredicted RBP9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 CD24P25063 80 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 MRPS15P82914 257 aaKnown RBP9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 LSAMPQ13449 338 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 ARFRP1Q13795 201 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 HERPUD1Q15011 391 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 FBLN7Q53RD9 439 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 AWAT1Q58HT5 328 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 LY6G6FQ5SQ64 297 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 HACD4Q5VWC8 232 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 STEAP3Q658P3 488 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 CCDC144NLQ6NUI1 221 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 ABCG5Q9H222 651 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 DCSTAMPQ9H295 470 aa9.09□□□□□ -0.95
CCL3L3-201ENST00000612839 A0A0A6YYH2 397 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 IGKV1-6A0A0C4DH72 117 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 A6NJ64 397 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 TRDCB7Z8K6 153 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 HSD17B6O14756 317 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 MDKP21741 143 aaPredicted RBP9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 MNDAP41218 407 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 RAB7AP51149 207 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 ARHGDIBP52566 201 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 ZNF137PP52743 207 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 RAG2P55895 527 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 ZNF816Q0VGE8 651 aaPredicted RBP9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 FOXL1Q12952 345 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 DHRS7BQ6IAN0 325 aaPredicted RBP9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 TMEM219Q86XT9 240 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 ODF3L1Q8IXM7 274 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 MAFIPQ8WZ33 124 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 CFHR4Q92496 578 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 PHF21AQ96BD5 680 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 ABHD14AQ9BUJ0 271 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 OR1A1Q9P1Q5 309 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 SLC23A1Q9UHI7 598 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 TRAV18A0A075B6X5 111 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 IGKV1D-8A0A087WSZ0 117 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 TIMM23O14925 209 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 FABP7O15540 132 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 RGS11O94810 467 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 NDUFA7O95182 113 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 GSTT2P0CG29 244 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 GSTT2BP0CG30 244 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 ZBTB25P24278 435 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 BRS3P32247 399 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 TALDO1P37837 337 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 REG1BP48304 166 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 RORCP51449 518 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 HABP2Q14520 560 aaPredicted RBP9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 SRSF7Q16629 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 PNLIPRP3Q17RR3 467 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 UBE2NLQ5JXB2 153 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 XP32Q5T750 250 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 Q6ZS49 121 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 Q6ZSV7 163 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 IZUMO1Q8IYV9 350 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 OR8H3Q8N146 312 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 LYG1Q8N1E2 194 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 SAMD12Q8N8I0 201 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 OR56B4Q8NH76 319 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 DYNC2LI1Q8TCX1 351 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 NUDCD2Q8WVJ2 157 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 RTN4IP1Q8WWV3 396 aaPredicted RBP9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 PARP12Q9H0J9 701 aaKnown RBP9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 DIABLOQ9NR28 239 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 PITPNC1Q9UKF7 332 aa9.08□□□□□ -0.96
CCL3L3-201ENST00000612839 IGHV1-3A0A0C4DH29 117 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 FAM90A9PA6NNJ1 464 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 XRCC3O43542 346 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 SSX5O60225 188 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 TSPAN9O75954 239 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 GAPDHP04406 335 aaKnown RBP9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 DTYMKP23919 212 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 IL3RAP26951 378 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 CEACAM6P40199 344 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 KIR2DS4P43632 304 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 GNG2P59768 71 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 PITPNAQ00169 270 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 KIR2DS1Q14954 304 aa9.07□□□□□ -0.96
CCL3L3-201ENST00000612839 IGSF11Q5DX21 431 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms