RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 ECI1P42126 302 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 EFNA4P52798 201 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 UCP3P55916 312 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 PIGPP57054 158 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 RPL31P62899 125 aaKnown RBP6.68□□□□□ -1.34
TARDBP-213ENST00000611963 SURF2Q15527 256 aaPredicted RBP6.68□□□□□ -1.34
TARDBP-213ENST00000611963 C2orf68Q2NKX9 166 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 CR1LQ2VPA4 569 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 ABCA11PQ4W5N1 156 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 LRRC10Q5BKY1 277 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 UTF1Q5T230 341 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 PRAMEF5Q5TYX0 476 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 CD276Q5ZPR3 534 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 LIN54Q6MZP7 749 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 TRAT1Q6PIZ9 186 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 ZNF554Q86TJ5 538 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 SLC38A6Q8IZM9 456 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 FAM185AQ8N0U4 392 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 OR11H7Q8NGC8 314 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 RAB1CQ92928 201 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 NINJ1Q92982 152 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 GALMQ96C23 342 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 TIMD4Q96H15 378 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 ST6GAL2Q96JF0 529 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 DMRTB1Q96MA1 342 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 RSRP1Q9BUV0 290 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 ALX4Q9H161 411 aaPredicted RBP6.68□□□□□ -1.34
TARDBP-213ENST00000611963 NCOR1P1Q9H4R4 102 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 RANGRFQ9HD47 186 aaPredicted RBP6.68□□□□□ -1.34
TARDBP-213ENST00000611963 RDH8Q9NYR8 311 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 MGAT4CQ9UBM8 478 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 KAAG1Q9UBP8 84 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 KCNS2Q9ULS6 477 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 OR2W1Q9Y3N9 320 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 C2CD3Q4AC94 2353 aa6.68□□□□□ -1.34
TARDBP-213ENST00000611963 ZFHX3Q15911 3703 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 TEX13DA0A0J9YY54 714 aaPredicted RBP6.67□□□□□ -1.34
TARDBP-213ENST00000611963 KBTBD11-OT1A0A1B0GTJ5 212 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 CRYM-AS1A6NIL9 109 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 F2RL2O00254 374 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 MMP23AO75900 390 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 SIX6O95475 246 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 SFT2D2O95562 160 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 IGHV3-7P01780 117 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 HEXAP06865 529 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 OR8U9P0C7N5 309 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 CCL3L1P16619 93 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 CD34P28906 385 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 GNRHRP30968 328 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 GPR6P46095 362 aaPredicted RBP6.67□□□□□ -1.34
TARDBP-213ENST00000611963 LUMP51884 338 aaPredicted RBP6.67□□□□□ -1.34
TARDBP-213ENST00000611963 SUPT4H1P63272 117 aaKnown RBP6.67□□□□□ -1.34
TARDBP-213ENST00000611963 DHODHQ02127 395 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 ANKRD55Q3KP44 614 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 TMEM128Q5BJH2 165 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 TMEM200BQ69YZ2 307 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 FAHD2BQ6P2I3 314 aaPredicted RBP6.67□□□□□ -1.34
TARDBP-213ENST00000611963 ZNF818PQ6ZRF7 136 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 C12orf45Q8N5I9 185 aaPredicted RBP6.67□□□□□ -1.34
TARDBP-213ENST00000611963 ZNF525Q8N782 197 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 ZNF565Q8N9K5 539 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 OR8U1Q8NH10 309 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 CORO2AQ92828 525 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 LEAP2Q969E1 77 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 FAHD2AQ96GK7 314 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 C5orf30Q96GV9 206 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 FYTTD1Q96QD9 318 aaKnown RBP6.67□□□□□ -1.34
TARDBP-213ENST00000611963 FOXC2Q99958 501 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 OR2S2Q9NQN1 319 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 CCL28Q9NRJ3 127 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 SLC2A9Q9NRM0 540 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 GNG12Q9UBI6 72 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 CLN8Q9UBY8 286 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 RNF150Q9ULK6 438 aa6.67□□□□□ -1.34
TARDBP-213ENST00000611963 RBM7Q9Y580 266 aaKnown RBP6.67□□□□□ -1.34
TARDBP-213ENST00000611963 ZNF469Q96JG9 3925 aaPredicted RBP6.67□□□□□ -1.34
TARDBP-213ENST00000611963 hADV38S2A0JD32 116 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 ZNF729A6NN14 1252 aaPredicted RBP6.66□□□□□ -1.34
TARDBP-213ENST00000611963 F5H0A9 414 aaPredicted RBP6.66□□□□□ -1.34
TARDBP-213ENST00000611963 SMLR1H3BR10 107 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 GPR31O00270 319 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 CCSO14618 274 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 GOSR2O14653 212 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 SLC31A2O15432 143 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 PHF1O43189 567 aaPredicted RBP6.66□□□□□ -1.34
TARDBP-213ENST00000611963 TNFSF12O43508 249 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 FSTL3O95633 263 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 HNRNPCP07910 306 aaKnown RBP eCLIP6.66□□□□□ -1.34
TARDBP-213ENST00000611963 GZMHP20718 246 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 NFYBP25208 207 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 TMEM33P57088 247 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 LOXL3P58215 753 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 ERVFRD-1P60508 538 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 HTD2P86397 168 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 MEF2CQ06413 473 aaPredicted RBP6.66□□□□□ -1.34
TARDBP-213ENST00000611963 TMEM155Q4W5P6 130 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 ZNF841Q6ZN19 808 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 KCTD9Q7L273 389 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 KRTAP1-3Q8IUG1 177 aa6.66□□□□□ -1.34
TARDBP-213ENST00000611963 SGPP2Q8IWX5 399 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms