RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 LGALS14Q8TCE9 139 aa20.8■□□□□ 0.92
VEGFA-226ENST00000611736 RTN4IP1Q8WWV3 396 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-226ENST00000611736 ST6GALNAC6Q969X2 333 aa20.8■□□□□ 0.92
VEGFA-226ENST00000611736 Q9N2K0 584 aa20.8■□□□□ 0.92
VEGFA-226ENST00000611736 WNK1Q9H4A3 2382 aa20.8■□□□□ 0.92
VEGFA-226ENST00000611736 TRIM64CA6NLI5 447 aa20.79■□□□□ 0.92
VEGFA-226ENST00000611736 YPEL1O60688 119 aa20.79■□□□□ 0.92
VEGFA-226ENST00000611736 HNF4GQ14541 408 aa20.79■□□□□ 0.92
VEGFA-226ENST00000611736 STEAP3Q658P3 488 aa20.79■□□□□ 0.92
VEGFA-226ENST00000611736 THNSL2Q86YJ6 484 aa20.79■□□□□ 0.92
VEGFA-226ENST00000611736 Q8N2B8 174 aa20.79■□□□□ 0.92
VEGFA-226ENST00000611736 YPEL2Q96QA6 119 aa20.79■□□□□ 0.92
VEGFA-226ENST00000611736 MGAT4AQ9UM21 535 aa20.79■□□□□ 0.92
VEGFA-226ENST00000611736 MFNGO00587 321 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 IGKV1D-33P01593 117 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 IGKV1-33P01594 117 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 VSIG10L2P0DP72 767 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 HIST1H1DP16402 221 aaKnown RBP20.78■□□□□ 0.92
VEGFA-226ENST00000611736 ZNF137PP52743 207 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 LSM3P62310 102 aaKnown RBP20.78■□□□□ 0.92
VEGFA-226ENST00000611736 IDNKQ5T6J7 187 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 C11orf88Q6PI97 169 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 KLHDC1Q8N7A1 406 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 OR2AK2Q8NG84 335 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 CMYA5Q8N3K9 4069 aa20.78■□□□□ 0.92
VEGFA-226ENST00000611736 VWFP04275 2813 aa20.77■□□□□ 0.92
VEGFA-226ENST00000611736 LPLP06858 475 aa20.77■□□□□ 0.92
VEGFA-226ENST00000611736 SCTP09683 121 aa20.77■□□□□ 0.92
VEGFA-226ENST00000611736 TMEM11P17152 192 aa20.77■□□□□ 0.92
VEGFA-226ENST00000611736 TMEM95Q3KNT9 176 aa20.77■□□□□ 0.92
VEGFA-226ENST00000611736 TGIF2LXQ8IUE1 241 aa20.77■□□□□ 0.92
VEGFA-226ENST00000611736 SERTAD4Q9NUC0 356 aa20.77■□□□□ 0.92
VEGFA-226ENST00000611736 SLC23A1Q9UHI7 598 aa20.77■□□□□ 0.92
VEGFA-226ENST00000611736 SH2D7A6NKC9 451 aaPredicted RBP20.76■□□□□ 0.91
VEGFA-226ENST00000611736 SMIM18P0DKX4 95 aa20.76■□□□□ 0.91
VEGFA-226ENST00000611736 ABCA11PQ4W5N1 156 aa20.76■□□□□ 0.91
VEGFA-226ENST00000611736 LY6G6FQ5SQ64 297 aa20.76■□□□□ 0.91
VEGFA-226ENST00000611736 OR1A1Q9P1Q5 309 aa20.76■□□□□ 0.91
VEGFA-226ENST00000611736 MOB4Q9Y3A3 225 aa20.76■□□□□ 0.91
VEGFA-226ENST00000611736 FCGR3AP08637 254 aa20.75■□□□□ 0.91
VEGFA-226ENST00000611736 VDAC2P45880 294 aaPredicted RBP20.75■□□□□ 0.91
VEGFA-226ENST00000611736 ARFRP1Q13795 201 aa20.75■□□□□ 0.91
VEGFA-226ENST00000611736 OR5H6Q8NGV6 325 aa20.75■□□□□ 0.91
VEGFA-226ENST00000611736 PARP12Q9H0J9 701 aaKnown RBP20.75■□□□□ 0.91
VEGFA-226ENST00000611736 SERPINE3A8MV23 424 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 TRDCB7Z8K6 153 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 ST8SIA5O15466 376 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 HSPA12AO43301 675 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 TXNL1O43396 289 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 LANCL1O43813 399 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 PEX14O75381 377 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 AMY1AP04745 511 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 AMY2AP04746 511 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 ODF3L1Q8IXM7 274 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 IZUMO1Q8IYV9 350 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 C11orf44Q8N8P7 122 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 MAFIPQ8WZ33 124 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 RHBDL2Q9NX52 303 aa20.74■□□□□ 0.91
VEGFA-226ENST00000611736 ELF5Q9UKW6 265 aaPredicted RBP20.74■□□□□ 0.91
VEGFA-226ENST00000611736 ZNF736B4DX44 427 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-226ENST00000611736 M0QZK8 103 aa20.73■□□□□ 0.91
VEGFA-226ENST00000611736 CEACAM6P40199 344 aa20.73■□□□□ 0.91
VEGFA-226ENST00000611736 OR3A3P47888 321 aa20.73■□□□□ 0.91
VEGFA-226ENST00000611736 C9orf152Q5JTZ5 239 aa20.73■□□□□ 0.91
VEGFA-226ENST00000611736 HIST2H2BDQ6DRA6 164 aa20.73■□□□□ 0.91
VEGFA-226ENST00000611736 RBMXL1Q96E39 390 aaKnown RBP20.73■□□□□ 0.91
VEGFA-226ENST00000611736 EAF1Q96JC9 268 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-226ENST00000611736 FUNDC2Q9BWH2 189 aa20.73■□□□□ 0.91
VEGFA-226ENST00000611736 IFI27L2Q9H2X8 130 aa20.73■□□□□ 0.91
VEGFA-226ENST00000611736 ZNF230Q9UIE0 474 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-226ENST00000611736 SAA2-SAA4A0A096LPE2 208 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 IGKV1-6A0A0C4DH72 117 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 SAA2P0DJI9 122 aaPredicted RBP20.72■□□□□ 0.91
VEGFA-226ENST00000611736 ZBTB25P24278 435 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 CD1BP29016 333 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 TALDO1P37837 337 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 EBI3Q14213 229 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 HERPUD1Q15011 391 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 CDNFQ49AH0 187 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 OR2T10Q8NGZ9 312 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 ETV7Q9Y603 341 aa20.72■□□□□ 0.91
VEGFA-226ENST00000611736 FABP7O15540 132 aa20.71■□□□□ 0.91
VEGFA-226ENST00000611736 RPS19P39019 145 aaKnown RBP20.71■□□□□ 0.91
VEGFA-226ENST00000611736 ARL6IP1Q15041 203 aa20.71■□□□□ 0.91
VEGFA-226ENST00000611736 PRR31Q5SQ13 230 aa20.71■□□□□ 0.91
VEGFA-226ENST00000611736 OR13F1Q8NGS4 319 aa20.71■□□□□ 0.91
VEGFA-226ENST00000611736 SLC25A38Q96DW6 304 aa20.71■□□□□ 0.91
VEGFA-226ENST00000611736 MRPL20Q9BYC9 149 aaKnown RBP20.71■□□□□ 0.91
VEGFA-226ENST00000611736 TET2Q6N021 2002 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-226ENST00000611736 SCGNO76038 276 aa20.7■□□□□ 0.9
VEGFA-226ENST00000611736 SCAND1P57086 179 aa20.7■□□□□ 0.9
VEGFA-226ENST00000611736 LSAMPQ13449 338 aa20.7■□□□□ 0.9
VEGFA-226ENST00000611736 KIR2DS1Q14954 304 aa20.7■□□□□ 0.9
VEGFA-226ENST00000611736 ZNF833PQ6ZTB9 187 aa20.7■□□□□ 0.9
VEGFA-226ENST00000611736 C5orf56Q8N8D9 126 aa20.7■□□□□ 0.9
VEGFA-226ENST00000611736 OR4A4PQ8NGN8 299 aa20.7■□□□□ 0.9
VEGFA-226ENST00000611736 C11orf54Q9H0W9 315 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-226ENST00000611736 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.7■□□□□ 0.99e-6■□□□□ 9.4
VEGFA-226ENST00000611736 TMEM235A6NFC5 223 aa20.69■□□□□ 0.9
VEGFA-226ENST00000611736 NCBP2LA6PVI3 153 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms