RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 PARP12Q9H0J9 701 aaKnown RBP6.95□□□□□ -1.3
SNCA-212ENST00000611107 MMP28Q9H239 520 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 MIXL1Q9H2W2 232 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 DPAGT1Q9H3H5 408 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 AUNIPQ9H7T9 357 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 ZNF702PQ9H963 129 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 BEX1Q9HBH7 125 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 GNG12Q9UBI6 72 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 ZNF230Q9UIE0 474 aaPredicted RBP6.95□□□□□ -1.3
SNCA-212ENST00000611107 JPT1Q9UK76 154 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 NOTCH3Q9UM47 2321 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 NOTCH1P46531 2555 aa6.95□□□□□ -1.3
SNCA-212ENST00000611107 TRAV18A0A075B6X5 111 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 SMIM31A0A1B0GVY4 71 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 DPPA5A6NC42 116 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 POM121CA8CG34 1229 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 LY6LH3BQJ8 138 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 J3QR06 171 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 SCTP09683 121 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 DTYMKP23919 212 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 SOX6P35712 828 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 TAS2R20P59543 309 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 GNG2P59768 71 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 BLCAPP62952 87 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 HTD2P86397 168 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 MADCAM1Q13477 382 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 ARFRP1Q13795 201 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 ARL6IP1Q15041 203 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 PNLIPRP3Q17RR3 467 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 TMEM69Q5SWH9 247 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 MINOS1Q5TGZ0 78 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 DHRS7BQ6IAN0 325 aaPredicted RBP6.94□□□□□ -1.3
SNCA-212ENST00000611107 Q6ZS49 121 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 LYG1Q8N1E2 194 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 C11orf44Q8N8P7 122 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 OR52L2PQ8NGH6 319 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 OR4F5Q8NH21 305 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 ZNF596Q8TC21 504 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 IL1F10Q8WWZ1 152 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 CMTM3Q96MX0 182 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 DCUN1D5Q9BTE7 237 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 CABLES2Q9BTV7 478 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 NXF2Q9GZY0 626 aaKnown RBP6.94□□□□□ -1.3
SNCA-212ENST00000611107 SERTAD4Q9NUC0 356 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 KCNIP1Q9NZI2 227 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 OR1A1Q9P1Q5 309 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 MGAT4AQ9UM21 535 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 MINOS1-NBL1R4GNA1 71 aa6.94□□□□□ -1.3
SNCA-212ENST00000611107 VGLL3A8MV65 326 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 BUB1B-PAK6H3BSN5 160 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 CTDSP2O14595 271 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 FABP7O15540 132 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 WIPF1O43516 503 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 AMY1AP04745 511 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 AMY2AP04746 511 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 HTR1DP28221 377 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 ZNF134P52741 427 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 LGALS4P56470 323 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 MRPS15P82914 257 aaKnown RBP6.93□□□□□ -1.3
SNCA-212ENST00000611107 Q3ZCU0 254 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 IGSF11Q5DX21 431 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 TPTE2P1Q5T6R2 138 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 STEAP3Q658P3 488 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 MZT2AQ6P582 158 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 C10orf99Q6UWK7 81 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 SLC25A48Q6ZT89 311 aaKnown RBP6.93□□□□□ -1.3
SNCA-212ENST00000611107 LINC00311Q8N616 119 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 C8orf31Q8N9H6 132 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 SGMS2Q8NHU3 365 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 WIPF2Q8TF74 440 aaPredicted RBP6.93□□□□□ -1.3
SNCA-212ENST00000611107 SNAPC3Q92966 411 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 PHF21AQ96BD5 680 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 GALMQ96C23 342 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 S100A16Q96FQ6 103 aaKnown RBP6.93□□□□□ -1.3
SNCA-212ENST00000611107 ABHD14AQ9BUJ0 271 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 IFI27L2Q9H2X8 130 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 RAB9BQ9NP90 201 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 OR2S2Q9NQN1 319 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 DIABLOQ9NR28 239 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 SLC23A1Q9UHI7 598 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 ANAPC10Q9UM13 185 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 TCF19Q9Y242 345 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 DNAH3Q8TD57 4116 aa6.93□□□□□ -1.3
SNCA-212ENST00000611107 A0A1W2PPI3 338 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 MEIS3P1A6NDR6 274 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 TRDCB7Z8K6 153 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 TOR1AO14656 332 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 YPEL1O60688 119 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 DIRAS3O95661 229 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 HLA-DQB1P01920 261 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 GSTT2P0CG29 244 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 GSTT2BP0CG30 244 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 TALDO1P37837 337 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 MNDAP41218 407 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 KIR2DS4P43632 304 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 ZNF137PP52743 207 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 PITPNAQ00169 270 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 KIR2DS1Q14954 304 aa6.92□□□□□ -1.3
SNCA-212ENST00000611107 SRSF7Q16629 238 aaKnown RBP eCLIP6.92□□□□□ -1.3
SNCA-212ENST00000611107 MORN2Q502X0 79 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms