RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TFDP3Q5H9I0 405 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 TCEAL5Q5H9L2 206 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 HENMT1Q5T8I9 393 aaKnown RBP3.41□□□□□ -1.86
LINC00397-202ENST00000606785 IZUMO2Q6UXV1 221 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 DOLPP1Q86YN1 238 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 SLC30A8Q8IWU4 369 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 PDZD9Q8IXQ8 264 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 TCTE3Q8IZS6 198 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 RNF175Q8N4F7 328 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 Q8N976 141 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 OR13G1Q8NGZ3 307 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 OR5K1Q8NHB7 308 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 PIFOQ8TCI5 191 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 ASB13Q8WXK3 278 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 ROPN1LQ96C74 230 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 SMIM19Q96E16 107 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 REEP6Q96HR9 211 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 BMFQ96LC9 184 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 KCTD7Q96MP8 289 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 OR52E6Q96RD3 313 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 TBX5Q99593 518 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 SULT4A1Q9BR01 284 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 SNHG12Q9BXW3 62 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 TMEM216Q9P0N5 145 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 SS18L2Q9UHA2 77 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 ZNF230Q9UIE0 474 aaPredicted RBP3.41□□□□□ -1.86
LINC00397-202ENST00000606785 KLF12Q9Y4X4 402 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 PHIPQ8WWQ0 1821 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 KIAA1551Q9HCM1 1747 aa3.41□□□□□ -1.86
LINC00397-202ENST00000606785 MTCL1Q9Y4B5 1905 aaKnown RBP3.4□□□□□ -1.86
LINC00397-202ENST00000606785 ZNF646O15015 1829 aaPredicted RBP3.4□□□□□ -1.86
LINC00397-202ENST00000606785 MYH10P35580 1976 aa3.4□□□□□ -1.86
LINC00397-202ENST00000606785 TRBV6-6A0A0A6YYG2 114 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 IGHV5-51A0A0C4DH38 117 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 IGKV1-8A0A0C4DH67 115 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 TRAPPC13A5PLN9 417 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 J3QLI3 93 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 K7EN84 100 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 KDM6AO15550 1401 aaPredicted RBP3.4□□□□□ -1.87
LINC00397-202ENST00000606785 FOXH1O75593 365 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 ATG12O94817 140 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 SLC25A14O95258 325 aaPredicted RBP3.4□□□□□ -1.87
LINC00397-202ENST00000606785 RAB36O95755 333 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 HAND1O96004 215 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 TYMSP04818 313 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 KRTAP1-4P0C5Y4 121 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 HIST1H1TP22492 207 aaPredicted RBP3.4□□□□□ -1.87
LINC00397-202ENST00000606785 ADAMTS12P58397 1594 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 TAS2R43P59537 309 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 TAS2R46P59540 309 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 BAXQ07812 192 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 NAIPQ13075 1403 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 MAD2L1BPQ15013 274 aaPredicted RBP3.4□□□□□ -1.87
LINC00397-202ENST00000606785 RSU1Q15404 277 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 NEDD8Q15843 81 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 ZNF181Q2M3W8 571 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 Q5BKY6 102 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 GLYATQ6IB77 296 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 CASP12Q6UXS9 341 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 ARPINQ7Z6K5 226 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 DEFB128Q7Z7B8 93 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 ARIH2OSQ8N7S6 290 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 UBAC2Q8NBM4 344 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 SLC30A7Q8NEW0 376 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 OR4M1Q8NGD0 313 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 OR52E4Q8NGH9 312 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 OR10G6Q8NH81 332 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 SYNPRQ8TBG9 265 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 Q8WTZ3 238 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 FAM104AQ969W3 186 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 ISOC1Q96CN7 298 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 TIMM17AQ99595 171 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 GABRG3Q99928 467 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 CMSS1Q9BQ75 279 aaKnown RBP3.4□□□□□ -1.87
LINC00397-202ENST00000606785 SUCNR1Q9BXA5 334 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 PECRQ9BY49 303 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 IFI27L2Q9H2X8 130 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 RPP21Q9H633 154 aaKnown RBP3.4□□□□□ -1.87
LINC00397-202ENST00000606785 YTHDC2Q9H6S0 1430 aaKnown RBP3.4□□□□□ -1.87
LINC00397-202ENST00000606785 RNF122Q9H9V4 155 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 SAR1AQ9NR31 198 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 SIGLEC9Q9Y336 463 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 V9GYS6 101 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 CCDC88BA6NC98 1476 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 MLH3Q9UHC1 1453 aa3.4□□□□□ -1.87
LINC00397-202ENST00000606785 ARHGEF11O15085 1522 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 MEIKINA0A087WXM9 373 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 SMIM26A0A096LP01 95 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 KIR2DS1A0A191URI9 304 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 TMEM72A0PK05 275 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 TMEM150BA6NC51 233 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 TVP23AA6NH52 213 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 CLDN24A6NM45 220 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 KLLNB2CW77 178 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 H0Y9J4 135 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 J3QRK9 145 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 CORTO00230 105 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 MANBAO00462 879 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 MPZL2O60487 215 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 SNAPC5O75971 98 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms