RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 STEAP1BQ6NZ63 245 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 LDLRAD3Q86YD5 345 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 GDPD1Q8N9F7 314 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 TMEM229BQ8NBD8 167 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 OR11H6Q8NGC7 330 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 OR13D1Q8NGV5 346 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 OR5H2Q8NGV7 314 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 OR10J5Q8NHC4 309 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 WDR12Q9GZL7 423 aaKnown RBP6.25□□□□□ -1.41
MSH6-211ENST00000606499 TINAGL1Q9GZM7 467 aaPredicted RBP6.25□□□□□ -1.41
MSH6-211ENST00000606499 HEXA-AS1Q9H8Q6 139 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 NECAP2Q9NVZ3 263 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 RDH8Q9NYR8 311 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 EHFQ9NZC4 300 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 ZNF69Q9UC07 566 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 SOX21Q9Y651 276 aaPredicted RBP6.25□□□□□ -1.41
MSH6-211ENST00000606499 ABCA1O95477 2261 aa6.25□□□□□ -1.41
MSH6-211ENST00000606499 WNK2Q9Y3S1 2297 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 J3QR06 171 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 TOR1AO14656 332 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 NPFFO15130 113 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 ST8SIA5O15466 376 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 YPEL1O60688 119 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 DIRAS3O95661 229 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 RAB3DO95716 219 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 HNF1AP20823 631 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 AADACP22760 399 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 CD40LGP29965 261 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 FCGR2CP31995 323 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 TAS2R19P59542 299 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 SSBP1Q04837 148 aaKnown RBP6.24□□□□□ -1.41
MSH6-211ENST00000606499 DYRK1AQ13627 763 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 KLF9Q13886 244 aaPredicted RBP6.24□□□□□ -1.41
MSH6-211ENST00000606499 HLA-DRB5Q30154 266 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 ACTBL2Q562R1 376 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 RNASE10Q5GAN6 216 aaKnown RBP6.24□□□□□ -1.41
MSH6-211ENST00000606499 CT45A1Q5HYN5 189 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 TRIQKQ629K1 86 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 ZNF57Q68EA5 555 aaPredicted RBP6.24□□□□□ -1.41
MSH6-211ENST00000606499 SLC25A48Q6ZT89 311 aaKnown RBP6.24□□□□□ -1.41
MSH6-211ENST00000606499 OVCH2Q7RTZ1 564 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 LHFPL4Q7Z7J7 247 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 H1FOOQ8IZA3 346 aaPredicted RBP6.24□□□□□ -1.41
MSH6-211ENST00000606499 OR2AK2Q8NG84 335 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 OR4P4Q8NGL7 312 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 OR4C16Q8NGL9 310 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 OR56B4Q8NH76 319 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 OR9G1Q8NH87 305 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 CT45A3Q8NHU0 189 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 NANPQ8TBE9 248 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 C17orf50Q8WW18 174 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 C22orf15Q8WYQ4 148 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 YPEL2Q96QA6 119 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 TSC22D3Q99576 134 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 ABHD14AQ9BUJ0 271 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 MMP28Q9H239 520 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 IFI27L2Q9H2X8 130 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 NUP50Q9UKX7 468 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 MTORP42345 2549 aa6.24□□□□□ -1.41
MSH6-211ENST00000606499 SONP18583 2426 aaKnown RBP6.24□□□□□ -1.41
MSH6-211ENST00000606499 SAA2-SAA4A0A096LPE2 208 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 IGKV1D-13A0A0B4J2D9 117 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 A0A0U1RQK1 487 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 LINC00854A0A1B0GVQ3 168 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 MDFIC2A0A1B0GVS7 189 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 BUB1B-PAK6H3BSN5 160 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 TUSC2O75896 110 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 RGS11O94810 467 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 CD74P04233 296 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 AMY2AP04746 511 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 CTXN2P0C2S0 81 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 OR8U9P0C7N5 309 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 AKAIN1P0CW23 69 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 SAA2P0DJI9 122 aaPredicted RBP6.23□□□□□ -1.41
MSH6-211ENST00000606499 IGKV1-13P0DP09 117 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 TBPP20226 339 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 EPHA1P21709 976 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 SRP14P37108 136 aaKnown RBP6.23□□□□□ -1.41
MSH6-211ENST00000606499 INPP1P49441 399 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 PPP5CP53041 499 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 PRRX1P54821 245 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 FXYD4P59646 89 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 DIAPH2-AS1Q14236 149 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 MIDNQ504T8 468 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 VAX1Q5SQQ9 334 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 ZNF660Q6AZW8 331 aaPredicted RBP6.23□□□□□ -1.41
MSH6-211ENST00000606499 TMEM17Q86X19 198 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 ODF3L1Q8IXM7 274 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 BCL6BQ8N143 479 aaPredicted RBP6.23□□□□□ -1.41
MSH6-211ENST00000606499 LYG1Q8N1E2 194 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 DYNAPQ8N1N2 210 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 TOMM5Q8N4H5 51 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 LINC00311Q8N616 119 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 C8orf31Q8N9H6 132 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 BEND2Q8NDZ0 799 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 OR10X1Q8NGY0 326 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 OR8U1Q8NH10 309 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 ZNF596Q8TC21 504 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 EDARADDQ8WWZ3 215 aa6.23□□□□□ -1.41
MSH6-211ENST00000606499 CREB3L1Q96BA8 519 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms