RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 RIMS4Q9H426 269 aaPredicted RBP7.11□□□□□ -1.27
TRIM28-214ENST00000600840 C1RLQ9NZP8 487 aa7.11□□□□□ -1.27
TRIM28-214ENST00000600840 KPTNQ9Y664 436 aa7.11□□□□□ -1.27
TRIM28-214ENST00000600840 VWFP04275 2813 aa7.11□□□□□ -1.27
TRIM28-214ENST00000600840 DSCAML1Q8TD84 2053 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 MEIKINA0A087WXM9 373 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 A0A087X0M5 115 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 A0A0U1RQK1 487 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 A0A1B0GX30 115 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 ZNF729A6NN14 1252 aaPredicted RBP7.1□□□□□ -1.27
TRIM28-214ENST00000600840 M0R1W7 72 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 F2RL2O00254 374 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 PRAF2O60831 178 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 RBP4P02753 201 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 FCGR3AP08637 254 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 ZNF728P0DKX0 622 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 S100A1P23297 94 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 DTYMKP23919 212 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 FAUP35544 74 aaKnown RBP7.1□□□□□ -1.27
TRIM28-214ENST00000600840 LOXL3P58215 753 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 GUCA2AQ02747 115 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 SSBP1Q04837 148 aaKnown RBP7.1□□□□□ -1.27
TRIM28-214ENST00000600840 GPR157Q5UAW9 335 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 HEPN1Q6WQI6 88 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 TOMM5Q8N4H5 51 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 PIP4P2Q8N4L2 257 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 GRPEL2Q8TAA5 225 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 MRGPRDQ8TDS7 321 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 CCDC107Q8WV48 283 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 SMIM4Q8WVI0 70 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 NUDCD2Q8WVJ2 157 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 TRIM63Q969Q1 353 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 ZDHHC16Q969W1 377 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 AJUBAQ96IF1 538 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 KIRREL1Q96J84 757 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 CMSS1Q9BQ75 279 aaKnown RBP7.1□□□□□ -1.27
TRIM28-214ENST00000600840 TOLLIPQ9H0E2 274 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 C12orf4Q9NQ89 552 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 TAS2R8Q9NYW2 309 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 CALYQ9NYX4 217 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 OR6C3Q9NZP0 311 aa7.1□□□□□ -1.27
TRIM28-214ENST00000600840 ZNF230Q9UIE0 474 aaPredicted RBP7.1□□□□□ -1.27
TRIM28-214ENST00000600840 IGHV1-69DA0A0B4J2H0 117 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 A0A1W2PRD5 423 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 A0A1W2PRF3 423 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 A0A1W2PRM7 423 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 INMT-MINDY4F8WBC2 141 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 GABARAPH6UMI1 98 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 ATP6V1G1O75348 118 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 IGHV1-69P01742 117 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 IGHV4-59P01825 116 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 SCTP09683 121 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 IGHV1-8P0DP01 117 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 CD34P28906 385 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 SSTR5P35346 364 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 MRPS15P82914 257 aaKnown RBP7.09□□□□□ -1.27
TRIM28-214ENST00000600840 KLRD1Q13241 179 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 HERPUD1Q15011 391 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 TATDN3Q17R31 274 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 TMEM69Q5SWH9 247 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 LDLRAD2Q5SZI1 272 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 VMO1Q7Z5L0 202 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 HOGA1Q86XE5 327 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 FAM185AQ8N0U4 392 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 PNKDQ8N490 385 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 GVQW1Q8N7I0 195 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 ZNF565Q8N9K5 539 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 OR10A7Q8NGE5 316 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 OR1L1Q8NH94 360 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 RFESDQ8TAC1 157 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 SNAPC3Q92966 411 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 ZNF714Q96N38 554 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 SLA2Q9H6Q3 261 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 SCPEP1Q9HB40 452 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 TAF9BQ9HBM6 251 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 RBMX2Q9Y388 322 aaKnown RBP7.09□□□□□ -1.27
TRIM28-214ENST00000600840 MMP24Q9Y5R2 645 aa7.09□□□□□ -1.27
TRIM28-214ENST00000600840 WNK1Q9H4A3 2382 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 NOTCH1P46531 2555 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 TRGV10A0A0A0MS01 117 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 C7orf66A4D0T2 115 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 TRDCB7Z8K6 153 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 RNASEK-C17orf49H0YIS7 233 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 SULT1C2O00338 296 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 LANCL1O43813 399 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 HBZP02008 142 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 C1QBP02746 253 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 PRB2P02812 416 aaPredicted RBP7.08□□□□□ -1.28
TRIM28-214ENST00000600840 CD3GP09693 182 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 GSTT2P0CG29 244 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 PRSS3P35030 304 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 RRAS2P62070 204 aaPredicted RBP7.08□□□□□ -1.28
TRIM28-214ENST00000600840 HTD2P86397 168 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 MADCAM1Q13477 382 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 PLA1AQ53H76 456 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 LY6G6FQ5SQ64 297 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 METTL11BQ5VVY1 283 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 NOXA1Q86UR1 476 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF439Q8NDP4 499 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms