RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.93□□□□□ -0.34
LSM4-206ENST00000600289 KCNK7Q9Y2U2 307 aa12.93□□□□□ -0.34
LSM4-206ENST00000600289 A0A0B4J203 849 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 M0QZK8 103 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 ITGB1BP1O14713 200 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 SCGNO76038 276 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 HIST1H1DP16402 221 aaKnown RBP12.92□□□□□ -0.34
LSM4-206ENST00000600289 CD24P25063 80 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 GNMTQ14749 295 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 FBLN7Q53RD9 439 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 DRAM1Q8N682 238 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 OR52L2PQ8NGH6 319 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 OR56B4Q8NH76 319 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 HDHD3Q9BSH5 251 aaPredicted RBP12.92□□□□□ -0.34
LSM4-206ENST00000600289 ABHD14AQ9BUJ0 271 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 RNF167Q9H6Y7 350 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 SERTAD4Q9NUC0 356 aa12.92□□□□□ -0.34
LSM4-206ENST00000600289 TET2Q6N021 2002 aaPredicted RBP12.91□□□□□ -0.34
LSM4-206ENST00000600289 SMIM30A4D0T7 59 aa12.91□□□□□ -0.34
LSM4-206ENST00000600289 SERPINE3A8MV23 424 aa12.91□□□□□ -0.34
LSM4-206ENST00000600289 LANCL1O43813 399 aa12.91□□□□□ -0.34
LSM4-206ENST00000600289 DIRAS3O95661 229 aa12.91□□□□□ -0.34
LSM4-206ENST00000600289 SNRNP70P08621 437 aaKnown RBP12.91□□□□□ -0.34
LSM4-206ENST00000600289 PPP1CCP36873 323 aaKnown RBP12.91□□□□□ -0.34
LSM4-206ENST00000600289 FAM71F2Q6NXP2 309 aa12.91□□□□□ -0.34
LSM4-206ENST00000600289 CAPSLQ8WWF8 208 aa12.91□□□□□ -0.34
LSM4-206ENST00000600289 DAPK2Q9UIK4 370 aa12.91□□□□□ -0.34
LSM4-206ENST00000600289 MOB4Q9Y3A3 225 aa12.91□□□□□ -0.34
LSM4-206ENST00000600289 ETV7Q9Y603 341 aa12.91□□□□□ -0.34
LSM4-206ENST00000600289 FGF16O43320 207 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 AIREO43918 545 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 CD3GP09693 182 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 CD1BP29016 333 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 BLCAPP62952 87 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 SRSF7Q16629 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
LSM4-206ENST00000600289 Q6ZS49 121 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 C5orf24Q7Z6I8 188 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 TGIF2LXQ8IUE1 241 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 CROCCP3Q8IVE0 287 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 ODF3L1Q8IXM7 274 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 OR2AK2Q8NG84 335 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 SETD6Q8TBK2 473 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 LGALS14Q8TCE9 139 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 WIPF2Q8TF74 440 aaPredicted RBP12.9□□□□□ -0.34
LSM4-206ENST00000600289 GHITMQ9H3K2 345 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 SIGLEC9Q9Y336 463 aa12.9□□□□□ -0.34
LSM4-206ENST00000600289 AMY1AP04745 511 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 AMY2AP04746 511 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 FCGR3AP08637 254 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 CLEC2LP0C7M8 214 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 MRPS15P82914 257 aaKnown RBP12.89□□□□□ -0.35
LSM4-206ENST00000600289 MXD1Q05195 221 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 SRSF4Q08170 494 aaKnown RBP12.89□□□□□ -0.35
LSM4-206ENST00000600289 HERPUD1Q15011 391 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 LYG1Q8N1E2 194 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 Q8N6K4 173 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 OR13F1Q8NGS4 319 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 IL1F10Q8WWZ1 152 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 WNT10AQ9GZT5 417 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 TOLLIPQ9H0E2 274 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 ATG5Q9H1Y0 275 aa12.89□□□□□ -0.35
LSM4-206ENST00000600289 TRDCB7Z8K6 153 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 IGKV1D-33P01593 117 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 IGKV1-33P01594 117 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 SMIM18P0DKX4 95 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 SNRPBP14678 240 aaKnown RBP12.88□□□□□ -0.35
LSM4-206ENST00000600289 GNB3P16520 340 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 TMEM11P17152 192 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 ZBTB25P24278 435 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 REG1BP48304 166 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 KIR2DS1Q14954 304 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 Q6ZS46 218 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 MOB3BQ86TA1 216 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 KLHDC1Q8N7A1 406 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 OR4A4PQ8NGN8 299 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 OR2T10Q8NGZ9 312 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 EDARADDQ8WWZ3 215 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 CABLES2Q9BTV7 478 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 IFI27L2Q9H2X8 130 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 RHBDL2Q9NX52 303 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 PIPOXQ9P0Z9 390 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 SLC23A1Q9UHI7 598 aa12.88□□□□□ -0.35
LSM4-206ENST00000600289 A0A0A6YYH2 397 aa12.87□□□□□ -0.35
LSM4-206ENST00000600289 A6NJ64 397 aa12.87□□□□□ -0.35
LSM4-206ENST00000600289 GSTP1P09211 210 aaKnown RBP12.87□□□□□ -0.35
LSM4-206ENST00000600289 SCTP09683 121 aa12.87□□□□□ -0.35
LSM4-206ENST00000600289 DTYMKP23919 212 aa12.87□□□□□ -0.35
LSM4-206ENST00000600289 VDAC2P45880 294 aaPredicted RBP12.87□□□□□ -0.35
LSM4-206ENST00000600289 SERPINB10P48595 397 aa12.87□□□□□ -0.35
LSM4-206ENST00000600289 LSAMPQ13449 338 aa12.87□□□□□ -0.35
LSM4-206ENST00000600289 C5orf56Q8N8D9 126 aa12.87□□□□□ -0.35
LSM4-206ENST00000600289 OR8H1Q8NGG4 311 aa12.87□□□□□ -0.35
LSM4-206ENST00000600289 EAF1Q96JC9 268 aaPredicted RBP12.87□□□□□ -0.35
LSM4-206ENST00000600289 AGMATQ9BSE5 352 aa12.87□□□□□ -0.35
LSM4-206ENST00000600289 SAA2-SAA4A0A096LPE2 208 aa12.86□□□□□ -0.35
LSM4-206ENST00000600289 IGKV1-6A0A0C4DH72 117 aa12.86□□□□□ -0.35
LSM4-206ENST00000600289 M0QZ24 198 aa12.86□□□□□ -0.35
LSM4-206ENST00000600289 FABP7O15540 132 aa12.86□□□□□ -0.35
LSM4-206ENST00000600289 SAA2P0DJI9 122 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms