RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 JPT1Q9UK76 154 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 VPS13DQ5THJ4 4388 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 A0A0G2JLM5 398 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 IZUMO1RA6ND01 250 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 TMEM212A6NML5 194 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 H3BUA1 57 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 J3QLW9 94 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 ZNF780AO75290 641 aaPredicted RBP7.68□□□□□ -1.18
TRIM28-210ENST00000597618 CDRT1O95170 752 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 ZNF19P17023 458 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 SERPINA2P20848 420 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 PMS2P11Q13670 270 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 FLOT2Q14254 428 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 TATDN3Q17R31 274 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 MORN2Q502X0 79 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 KDM4DQ6B0I6 523 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 FAM131AQ6UXB0 335 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 ODF3L1Q8IXM7 274 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 RPP25LQ8N5L8 163 aaKnown RBP7.68□□□□□ -1.18
TRIM28-210ENST00000597618 POC5Q8NA72 575 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 LFNGQ8NES3 379 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 OR51A2Q8NGJ7 313 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 OR4K15Q8NH41 348 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 GATAD1Q8WUU5 269 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 MRPL48Q96GC5 212 aaKnown RBP7.68□□□□□ -1.18
TRIM28-210ENST00000597618 NSL1Q96IY1 281 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 C4orf36Q96KX1 117 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 RDH12Q96NR8 316 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 MYCBPQ99417 103 aaPredicted RBP7.68□□□□□ -1.18
TRIM28-210ENST00000597618 NEURL2Q9BR09 285 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 ZNF355PQ9NSJ1 428 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 SLC2A8Q9NY64 477 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 FAM53CQ9NYF3 392 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 RCC2Q9P258 522 aaKnown RBP7.68□□□□□ -1.18
TRIM28-210ENST00000597618 ING4Q9UNL4 249 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 GAB2Q9UQC2 676 aa7.68□□□□□ -1.18
TRIM28-210ENST00000597618 SAA2-SAA4A0A096LPE2 208 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 ANKRD34BA5PLL1 514 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 MCRIP1C9JLW8 97 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 G3V2T6 193 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 J3QRE1 110 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 FCN1O00602 326 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 CA11O75493 328 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 RBBP9O75884 186 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 OR2A4O95047 310 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 CSN3P07498 182 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 SAA2P0DJI9 122 aaPredicted RBP7.67□□□□□ -1.18
TRIM28-210ENST00000597618 GTF2F2P13984 249 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 CALB2P22676 271 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 PPP1CCP36873 323 aaKnown RBP7.67□□□□□ -1.18
TRIM28-210ENST00000597618 OR3A3P47888 321 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 ADARB1P78563 741 aaKnown RBP7.67□□□□□ -1.18
TRIM28-210ENST00000597618 GNMTQ14749 295 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 FAM71F2Q6NXP2 309 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 ZNF562Q6V9R5 426 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 ZNF554Q86TJ5 538 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 GAPTQ8N292 157 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 DEFB125Q8N687 156 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 ACBD7Q8N6N7 88 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 OR5AK2Q8NH90 309 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 MRPS24Q96EL2 167 aaKnown RBP7.67□□□□□ -1.18
TRIM28-210ENST00000597618 GABARAPL1Q9H0R8 117 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 SRD5A3Q9H8P0 318 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 TAF9BQ9HBM6 251 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 ZNF446Q9NWS9 450 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 TAS2R4Q9NYW5 299 aa7.67□□□□□ -1.18
TRIM28-210ENST00000597618 TCRBV3S1A0A5B6 114 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 OR5H14A6NHG9 310 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 FADS2O95864 444 aaKnown RBP7.66□□□□□ -1.18
TRIM28-210ENST00000597618 CA2P00918 260 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 RCC1P18754 421 aaPredicted RBP7.66□□□□□ -1.18
TRIM28-210ENST00000597618 AADACP22760 399 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 ZNF93P35789 620 aaPredicted RBP7.66□□□□□ -1.18
TRIM28-210ENST00000597618 HTD2P86397 168 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 MRPL28Q13084 256 aaKnown RBP7.66□□□□□ -1.18
TRIM28-210ENST00000597618 RPEL1Q2QD12 228 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 LY6G6FQ5SQ64 297 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 ZDHHC13Q8IUH4 622 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 SYS1Q8N2H4 156 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 OR2AK2Q8NG84 335 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 OR52L2PQ8NGH6 319 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 CIB1Q99828 191 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 PDCD1LG2Q9BQ51 273 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 THTPAQ9BU02 230 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 TMEM138Q9NPI0 162 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 KCNIP1Q9NZI2 227 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 PEMTQ9UBM1 199 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 METTL1Q9UBP6 276 aaKnown RBP7.66□□□□□ -1.18
TRIM28-210ENST00000597618 PEF1Q9UBV8 284 aaKnown RBP7.66□□□□□ -1.18
TRIM28-210ENST00000597618 SLC23A1Q9UHI7 598 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 KLK5Q9Y337 293 aaPredicted RBP7.66□□□□□ -1.18
TRIM28-210ENST00000597618 GMPPBQ9Y5P6 360 aa7.66□□□□□ -1.18
TRIM28-210ENST00000597618 PKHD1P08F94 4074 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 OR11H12B2RN74 326 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 SLC22A1O15245 554 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 AIREO43918 545 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 YPEL1O60688 119 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 SC5DO75845 299 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 CD2P06729 351 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 GSTP1P09211 210 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms