RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 S100A13Q99584 98 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 ZNF184Q99676 751 aaPredicted RBP7.66□□□□□ -1.18
LIG1-209ENST00000596104 LYSTQ99698 3801 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 ABHD14AQ9BUJ0 271 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 TAF9BQ9HBM6 251 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 OR2S2Q9NQN1 319 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 NUBP2Q9Y5Y2 271 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 CSMD3Q7Z407 3707 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 TRAV8-7A0A075B6U6 113 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 HSPA12AO43301 675 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 CA11O75493 328 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 GPX5O75715 221 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 IGLV1-51P01701 117 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 HSPB1P04792 205 aaKnown RBP7.65□□□□□ -1.18
LIG1-209ENST00000596104 PPP1CCP36873 323 aaKnown RBP7.65□□□□□ -1.18
LIG1-209ENST00000596104 OR3A3P47888 321 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 ALDH3A2P51648 485 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 PITPNAQ00169 270 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 RIPK1Q13546 671 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 GPR176Q14439 515 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 LRRC36Q1X8D7 754 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 CCDC58Q4VC31 144 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 LY6G6FQ5SQ64 297 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 SIGIRRQ6IA17 410 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 CD200R1LQ6Q8B3 271 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 ZNF554Q86TJ5 538 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 TCTEX1D1Q8N7M0 179 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 OR13C5Q8NGS8 318 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 OR4C12Q96R67 309 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 CST11Q9H112 138 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 JPT1Q9UK76 154 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 ORC6Q9Y5N6 252 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 PEX16Q9Y5Y5 336 aa7.65□□□□□ -1.18
LIG1-209ENST00000596104 SAA2-SAA4A0A096LPE2 208 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 TRBV5-5A0A0J9YX44 114 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 FCN1O00602 326 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 RRHO14718 337 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 OGG1O15527 345 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 YPEL1O60688 119 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 IGHV3-11P01762 117 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 GLAP06280 429 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 SAA2P0DJI9 122 aaPredicted RBP7.64□□□□□ -1.19
LIG1-209ENST00000596104 HTD2P86397 168 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 C6orf141Q5SZD1 244 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 MRPL30Q8TCC3 161 aaKnown RBP7.64□□□□□ -1.19
LIG1-209ENST00000596104 APH1BQ8WW43 257 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 PYDC1Q8WXC3 89 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 MUL1Q969V5 352 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 FLYWCH2Q96CP2 140 aaKnown RBP7.64□□□□□ -1.19
LIG1-209ENST00000596104 SMIM19Q96E16 107 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 RHOVQ96L33 236 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 Q96MT0 163 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 RDH12Q96NR8 316 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 YPEL2Q96QA6 119 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 IFI27L2Q9H2X8 130 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 FBXL15Q9H469 300 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 FGF20Q9NP95 211 aaPredicted RBP7.64□□□□□ -1.19
LIG1-209ENST00000596104 KIAA1456Q9P272 454 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 NKX1-2Q9UD57 310 aaPredicted RBP7.64□□□□□ -1.19
LIG1-209ENST00000596104 STUB1Q9UNE7 303 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 GAB2Q9UQC2 676 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 ERGIC3Q9Y282 383 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 A3GALT2U3KPV4 340 aa7.64□□□□□ -1.19
LIG1-209ENST00000596104 UBE2QL1A1L167 161 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 FAM90A7PA6NKC0 464 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 FAM90A23PA8MXZ1 464 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 H3BNX3 289 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 ARPC1BO15143 372 aaKnown RBP7.63□□□□□ -1.19
LIG1-209ENST00000596104 LALBAP00709 142 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 MAS1P04201 325 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 FSTP19883 344 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 FUT3P21217 361 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 ETV1P50549 477 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 RPS11P62280 158 aaKnown RBP eCLIP7.63□□□□□ -1.19
LIG1-209ENST00000596104 HAGHQ16775 308 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 OR2G6Q5TZ20 316 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 PYHIN1Q6K0P9 492 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 FAM71F2Q6NXP2 309 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 GLIPR1L1Q6UWM5 242 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 FAM131AQ6UXB0 335 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 SGPP2Q8IWX5 399 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 CBR4Q8N4T8 237 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 Q96M66 194 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 SELENOIQ9C0D9 397 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 BANF2Q9H503 90 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 KCNIP1Q9NZI2 227 aa7.63□□□□□ -1.19
LIG1-209ENST00000596104 CNOT2Q9NZN8 540 aaKnown RBP7.63□□□□□ -1.19
LIG1-209ENST00000596104 RPL36Q9Y3U8 105 aaKnown RBP7.63□□□□□ -1.19
LIG1-209ENST00000596104 TRBV5-7A0A0A0MS05 114 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 PDCD6O75340 191 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 CT45A6P0DMU7 189 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 CT45A5P0DMU8 189 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 CT45A7P0DMV0 189 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 SNRPBP14678 240 aaKnown RBP7.62□□□□□ -1.19
LIG1-209ENST00000596104 ARSBP15848 533 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 MGMTP16455 207 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 RASSF2P50749 326 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 TPPP2P59282 170 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 TMEM267Q0VDI3 215 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms