RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PPIAL4CA0A0B4J2A2 164 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 RBP4P02753 201 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 PPIAL4GP0DN37 164 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 GNRHRP30968 328 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 LUMP51884 338 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 TAS2R31P59538 309 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 UBE2MP61081 183 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 LTC4SQ16873 150 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 CLEC12BQ2HXU8 276 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 Q3ZCU0 254 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 UTF1Q5T230 341 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 LPCAT3Q6P1A2 487 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 TMED4Q7Z7H5 227 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 CADM3Q8N126 398 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 ADAD2Q8NCV1 583 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 BEX2Q9BXY8 128 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 SLC5A7Q9GZV3 580 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 BEX1Q9HBH7 125 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 GNG12Q9UBI6 72 aa12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 C14orf166Q9Y224 244 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-211ENST00000595945 NBPF19A0A087WUL8 3843 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 hCG_2014768A0A024R1R8 64 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 A0A087X0M5 115 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 A0A0A6YYJ9 748 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 A0A1B0GX30 115 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 RGS11O94810 467 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 IGLV2-14P01704 120 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 LIPFP07098 398 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 PI3P19957 117 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 ERVFRD-1P60508 538 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 RND3P61587 244 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 MSMO1Q15800 293 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 ZNF818PQ6ZRF7 136 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 KRTAP1-3Q8IUG1 177 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 SECTM1Q8WVN6 248 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 CAPSLQ8WWF8 208 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 EDARADDQ8WWZ3 215 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 SEC22CQ9BRL7 303 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 AGMATQ9BSE5 352 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 CCL28Q9NRJ3 127 aa12.09□□□□□ -0.47
SHKBP1-211ENST00000595945 A0A1W2PPH5 198 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 SNRPGP15A8MWD9 76 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 FAM157AC9JC47 383 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 GPR31O00270 319 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 OR4E1P0C645 316 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 OR8U9P0C7N5 309 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 BCAP31P51572 246 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 ZNF134P52741 427 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 SUPT4H1P63272 117 aaKnown RBP12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 TMEM128Q5BJH2 165 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 METTL11BQ5VVY1 283 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 PRSS57Q6UWY2 283 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 KIR3DL3Q8N743 410 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 C8orf31Q8N9H6 132 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 BVESQ8NE79 360 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 OR8U1Q8NH10 309 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 C5orf30Q96GV9 206 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 C1orf159Q96HA4 380 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 SESN1Q9Y6P5 492 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 NOTCH2Q04721 2471 aa12.08□□□□□ -0.48
SHKBP1-211ENST00000595945 IGHV2-70DA0A0C4DH43 119 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 CRYM-AS1A6NIL9 109 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 M0R1W7 72 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 SLC31A2O15432 143 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 FOXH1O75593 365 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 NFYBP25208 207 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 CD34P28906 385 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 ZNF626Q68DY1 528 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 C1orf122Q6ZSJ8 110 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 LYG2Q86SG7 212 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 ZNF645Q8N7E2 425 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 Q8N7P7 452 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 ZNF596Q8TC21 504 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 LEAP2Q969E1 77 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 AKR1E2Q96JD6 320 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 IFI27L2Q9H2X8 130 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 OR51J1Q9H342 316 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 GPN1Q9HCN4 374 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 SLC2A9Q9NRM0 540 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 GAB2Q9UQC2 676 aa12.07□□□□□ -0.48
SHKBP1-211ENST00000595945 MYO9AB2RTY4 2548 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 C9orf170A2RU37 121 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 HSD17B6O14756 317 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 ST8SIA5O15466 376 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 ENSAO43768 121 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 SLC22A5O76082 557 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 SFT2D2O95562 160 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 AKR1C4P17516 323 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 USF1P22415 310 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 RAB7AP51149 207 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 PIGPP57054 158 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 LCN2P80188 198 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 DHRS2Q13268 280 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 EIF4EBP1Q13541 118 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 ABCA11PQ4W5N1 156 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms