RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 IZUMO1Q8IYV9 350 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 Q8N6K4 173 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 C11orf44Q8N8P7 122 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 TSPAN14Q8NG11 270 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 OR10R2Q8NGX6 335 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 SETD6Q8TBK2 473 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 IL1F10Q8WWZ1 152 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 PTX4Q96A99 478 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 GALMQ96C23 342 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 YPEL2Q96QA6 119 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 ABHD14AQ9BUJ0 271 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 IFI27L2Q9H2X8 130 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 RIMS4Q9H426 269 aaPredicted RBP8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 Q9N2K0 584 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 C12orf4Q9NQ89 552 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 MOB4Q9Y3A3 225 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 IGKV1-6A0A0C4DH72 117 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 LOC100506127A0A0U1RQW1 187 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 LANCL1O43813 399 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 TNFAIP8O95379 198 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 LPLP06858 475 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 SCTP09683 121 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 SNRPBP14678 240 aaKnown RBP8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 TMEM11P17152 192 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 IL3RAP26951 378 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 TGFBR1P36897 503 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 RANBP1P43487 201 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 VDAC2P45880 294 aaPredicted RBP8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 HLA-DRB3P79483 266 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 MXD1Q05195 221 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 HES1Q14469 280 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 HNF4GQ14541 408 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 SFXN4Q6P4A7 337 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 MOB3BQ86TA1 216 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 LYG1Q8N1E2 194 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 C5orf56Q8N8D9 126 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 DTX3Q8N9I9 347 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 RAB3CQ96E17 227 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 YIPF6Q96EC8 236 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 EAF1Q96JC9 268 aaPredicted RBP8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 AKR1E2Q96JD6 320 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 KCTD7Q96MP8 289 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 CMSS1Q9BQ75 279 aaKnown RBP8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 ABRACLQ9P1F3 81 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 OR1A1Q9P1Q5 309 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 DAPK2Q9UIK4 370 aa8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 ELF5Q9UKW6 265 aaPredicted RBP8.73□□□□□ -1.01
SHKBP1-206ENST00000595523 A0A087WXM4 84 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 SAA2-SAA4A0A096LPE2 208 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 M0QZ24 198 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 M0QZK8 103 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 TXNL1O43396 289 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 FCGR3AP08637 254 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 SAA2P0DJI9 122 aaPredicted RBP8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 CD28P10747 220 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 HIST1H1DP16402 221 aaKnown RBP8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 GNB3P16520 340 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 CD1BP29016 333 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 OR3A3P47888 321 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 LSAMPQ13449 338 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 ZNF833PQ6ZTB9 187 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 TGIF2LXQ8IUE1 241 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 LGALS14Q8TCE9 139 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 ZNF251Q9BRH9 671 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 AGMATQ9BSE5 352 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 PLSCR3Q9NRY6 295 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 SLC23A1Q9UHI7 598 aa8.72□□□□□ -1.01
SHKBP1-206ENST00000595523 A0A075B6Q4 140 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 ADARB2-AS1A8MUL3 147 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 ST8SIA5O15466 376 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 FGF16O43320 207 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 RGS11O94810 467 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 ARSJQ5FYB0 599 aaPredicted RBP8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 TCTEX1D4Q5JR98 221 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 C10orf99Q6UWK7 81 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 OR2AK2Q8NG84 335 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 OR5H6Q8NGV6 325 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 OR2T10Q8NGZ9 312 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 SLC25A38Q96DW6 304 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 NABP2Q9BQ15 211 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 MRPL20Q9BYC9 149 aaKnown RBP8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 ATG5Q9H1Y0 275 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 ZNF230Q9UIE0 474 aaPredicted RBP8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 MGAT4AQ9UM21 535 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 TGP01266 2768 aa8.71□□□□□ -1.02
SHKBP1-206ENST00000595523 METTL21EPA6NDL7 271 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 TRDCB7Z8K6 153 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 ITGB1BP1O14713 200 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 PROP1O75360 226 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 FBXO24O75426 580 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 MOSP00540 346 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 CD3GP09693 182 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 SMIM18P0DKX4 95 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 CEACAM6P40199 344 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 C2orf68Q2NKX9 166 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 RPL39P5Q59GN2 51 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 C9orf152Q5JTZ5 239 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 Q8N9W7 124 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 MAFIPQ8WZ33 124 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms