RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 MMP28Q9H239 520 aa18.29■□□□□ 0.52
SNRNP70-204ENST00000595231 FAM157CP0CG43 387 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 SLC25A48Q6ZT89 311 aaKnown RBP18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 SMIM4Q8WVI0 70 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 MTFP1Q9UDX5 166 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 BUB1B-PAK6H3BSN5 160 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 HSPA12AO43301 675 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 CTXN2P0C2S0 81 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 LGALS4P56470 323 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 SPANXN2Q5MJ10 180 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 OR5AP2Q8NGF4 316 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 OR10J5Q8NHC4 309 aa18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 TBL2Q9Y4P3 447 aaKnown RBP18.28■□□□□ 0.52
SNRNP70-204ENST00000595231 LY6LH3BQJ8 138 aa18.27■□□□□ 0.52
SNRNP70-204ENST00000595231 RBBP9O75884 186 aa18.27■□□□□ 0.52
SNRNP70-204ENST00000595231 RGS11O94810 467 aa18.27■□□□□ 0.52
SNRNP70-204ENST00000595231 PTBP1P26599 531 aaKnown RBP eCLIP18.27■□□□□ 0.522e-7■□□□□ 10.9
SNRNP70-204ENST00000595231 HTR1DP28221 377 aa18.27■□□□□ 0.52
SNRNP70-204ENST00000595231 LINC00299Q6ZSB3 139 aa18.27■□□□□ 0.52
SNRNP70-204ENST00000595231 DYNAPQ8N1N2 210 aa18.27■□□□□ 0.52
SNRNP70-204ENST00000595231 ZNF48Q96MX3 618 aaPredicted RBP18.27■□□□□ 0.52
SNRNP70-204ENST00000595231 AGMATQ9BSE5 352 aa18.27■□□□□ 0.52
SNRNP70-204ENST00000595231 RDH8Q9NYR8 311 aa18.27■□□□□ 0.52
SNRNP70-204ENST00000595231 GSTZ1O43708 216 aaPredicted RBP18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 PAX6P26367 422 aa18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 RCVRNP35243 200 aa18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 ARPC4P59998 168 aa18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 DEFB112Q30KQ8 113 aa18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 MINOS1Q5TGZ0 78 aa18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 SLC6A7Q99884 636 aa18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 DPM3Q9P2X0 92 aa18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 RBMX2Q9Y388 322 aaKnown RBP18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 MINOS1-NBL1R4GNA1 71 aa18.26■□□□□ 0.51
SNRNP70-204ENST00000595231 MDFIC2A0A1B0GVS7 189 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 HLA-DMAP28067 261 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 H1FOOQ8IZA3 346 aaPredicted RBP18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 MALSU1Q96EH3 234 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 ABHD14AQ9BUJ0 271 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 C11orf54Q9H0W9 315 aaPredicted RBP18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 PRDM13Q9H4Q3 707 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 ITGB1BP1O14713 200 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 LANCL1O43813 399 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 RFX2P48378 723 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 OR2AK2Q8NG84 335 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 OR10X1Q8NGY0 326 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 GINS4Q9BRT9 223 aa18.25■□□□□ 0.51
SNRNP70-204ENST00000595231 ACTBP60709 375 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 ACTG1P63261 375 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 SSBP1Q04837 148 aaKnown RBP18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 SCGB2A2Q13296 93 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 CDK10Q15131 360 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 PYDC2Q56P42 97 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 OVCH2Q7RTZ1 564 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 ODF3L1Q8IXM7 274 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 ST6GALNAC6Q969X2 333 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 SRRQ9GZT4 340 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 IFI27L2Q9H2X8 130 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 NECAP2Q9NVZ3 263 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 FAM96BQ9Y3D0 163 aa18.24■□□□□ 0.51
SNRNP70-204ENST00000595231 SETD2Q9BYW2 2564 aaPredicted RBP18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 LEUTXA8MZ59 168 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 PMP2P02689 132 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 NFYAP23511 347 aaPredicted RBP18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 HRH1P35367 487 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 DIAPH2-AS1Q14236 149 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 SSX2Q16385 188 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 MFSD4AQ8N468 514 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 EDARADDQ8WWZ3 215 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 CREB3L1Q96BA8 519 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 MEGF9Q9H1U4 602 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 AKIP1Q9NQ31 210 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 HILPDAQ9Y5L2 63 aa18.23■□□□□ 0.51
SNRNP70-204ENST00000595231 ST8SIA5O15466 376 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 FBP1P09467 338 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 OR5H8P0DN80 308 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 ZNF137PP52743 207 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 TAS2R46P59540 309 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 LDLRAD3Q86YD5 345 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 Q8N402 240 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 THAP7Q9BT49 309 aaPredicted RBP18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 AMMECR1Q9Y4X0 333 aaPredicted RBP18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 NF1P21359 2839 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 TUSC2O75896 110 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 OR3A3P47888 321 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 ZNF45Q02386 682 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 DYRK1AQ13627 763 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 TPTE2P1Q5T6R2 138 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 LYG1Q8N1E2 194 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 SIGLECL1Q8N7X8 197 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 OR5H2Q8NGV7 314 aa18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 SDHCQ99643 169 aaPredicted RBP18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 ZNF107Q9UII5 783 aaPredicted RBP18.22■□□□□ 0.51
SNRNP70-204ENST00000595231 ZNF736B4DX44 427 aaPredicted RBP18.21■□□□□ 0.51
SNRNP70-204ENST00000595231 CD3DP04234 171 aa18.21■□□□□ 0.51
SNRNP70-204ENST00000595231 CEACAM3P40198 252 aa18.21■□□□□ 0.51
SNRNP70-204ENST00000595231 ZNF660Q6AZW8 331 aaPredicted RBP18.21■□□□□ 0.51
SNRNP70-204ENST00000595231 DHRS11Q6UWP2 260 aa18.21■□□□□ 0.51
SNRNP70-204ENST00000595231 TMEM229BQ8NBD8 167 aa18.21■□□□□ 0.51
SNRNP70-204ENST00000595231 ABHD14BQ96IU4 210 aa18.21■□□□□ 0.51
SNRNP70-204ENST00000595231 OCEL1Q9H607 264 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms