RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 VSIG4Q9Y279 399 aa16.21■□□□□ 0.19
LSM4-203ENST00000593829 DOCK11Q5JSL3 2073 aa16.21■□□□□ 0.19
LSM4-203ENST00000593829 SRD5A1P18405 259 aa16.21■□□□□ 0.19
LSM4-203ENST00000593829 TBPP20226 339 aa16.21■□□□□ 0.19
LSM4-203ENST00000593829 SRP14P37108 136 aaKnown RBP16.21■□□□□ 0.19
LSM4-203ENST00000593829 CEBPDP49716 269 aaPredicted RBP16.21■□□□□ 0.19
LSM4-203ENST00000593829 C1orf229Q6ZS94 237 aaPredicted RBP16.21■□□□□ 0.19
LSM4-203ENST00000593829 PNLDC1Q8NA58 520 aaKnown RBP16.21■□□□□ 0.19
LSM4-203ENST00000593829 SVEP1Q4LDE5 3571 aa16.2■□□□□ 0.18
LSM4-203ENST00000593829 ZFHX3Q15911 3703 aa16.2■□□□□ 0.18
LSM4-203ENST00000593829 C9orf170A2RU37 121 aa16.2■□□□□ 0.18
LSM4-203ENST00000593829 LIPFP07098 398 aa16.2■□□□□ 0.18
LSM4-203ENST00000593829 NDUFB7P17568 137 aa16.2■□□□□ 0.18
LSM4-203ENST00000593829 PTGFRP43088 359 aa16.2■□□□□ 0.18
LSM4-203ENST00000593829 DHRS7BQ6IAN0 325 aaPredicted RBP16.2■□□□□ 0.18
LSM4-203ENST00000593829 INO80EQ8NBZ0 244 aaPredicted RBP16.2■□□□□ 0.18
LSM4-203ENST00000593829 TSNAXQ99598 290 aaKnown RBP16.2■□□□□ 0.18
LSM4-203ENST00000593829 PHB2Q99623 299 aa16.2■□□□□ 0.18
LSM4-203ENST00000593829 METRNQ9UJH8 293 aa16.2■□□□□ 0.18
LSM4-203ENST00000593829 RPUSD1Q9UJJ7 312 aaKnown RBP16.2■□□□□ 0.18
LSM4-203ENST00000593829 SCGNO76038 276 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 SFTPBP07988 381 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 CHRM2P08172 466 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 FAM157CP0CG43 387 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 B2MP61769 119 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 ZNF260Q3ZCT1 412 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 RNASE10Q5GAN6 216 aaKnown RBP16.19■□□□□ 0.18
LSM4-203ENST00000593829 SPIN3Q5JUX0 258 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 C1QL2Q7Z5L3 287 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 OR1S2Q8NGQ3 325 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 SEBOXQ9HB31 216 aaPredicted RBP16.19■□□□□ 0.18
LSM4-203ENST00000593829 IL36RNQ9UBH0 155 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 RAB22AQ9UL26 194 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 WNK2Q9Y3S1 2297 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 TEX13DA0A0J9YY54 714 aaPredicted RBP16.19■□□□□ 0.18
LSM4-203ENST00000593829 OR3A4PP47883 348 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 COL10A1Q03692 680 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 ZNF146Q15072 292 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 PUSL1Q8N0Z8 303 aaKnown RBP16.19■□□□□ 0.18
LSM4-203ENST00000593829 OR5AP2Q8NGF4 316 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 H1FXQ92522 213 aaKnown RBP16.19■□□□□ 0.18
LSM4-203ENST00000593829 NKX3-1Q99801 234 aaPredicted RBP16.19■□□□□ 0.18
LSM4-203ENST00000593829 DCTN5Q9BTE1 182 aa16.19■□□□□ 0.18
LSM4-203ENST00000593829 ELL3Q9HB65 397 aaPredicted RBP16.19■□□□□ 0.18
LSM4-203ENST00000593829 METTL21EPA6NDL7 271 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 ZNF98A6NK75 572 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 DBX1A6NMT0 343 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 DUS4LO95620 317 aaKnown RBP16.18■□□□□ 0.18
LSM4-203ENST00000593829 HAND1O96004 215 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 S100A12P80511 92 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 PPP1R1AQ13522 171 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 RSU1Q15404 277 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 ASCL4Q6XD76 172 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 JAGN1Q8N5M9 183 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 NANPQ8TBE9 248 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 MRGPRFQ96AM1 343 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 FAM234AQ9H0X4 552 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 CST11Q9H112 138 aa16.18■□□□□ 0.18
LSM4-203ENST00000593829 TPT1P13693 172 aaKnown RBP16.17■□□□□ 0.18
LSM4-203ENST00000593829 DUSP1P28562 367 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 SNU13P55769 128 aaKnown RBP16.17■□□□□ 0.18
LSM4-203ENST00000593829 LDLRAD3Q86YD5 345 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 LY6G5BQ8NDX9 201 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 ARL11Q969Q4 196 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 NARS2Q96I59 477 aaKnown RBP16.17■□□□□ 0.18
LSM4-203ENST00000593829 S100A13Q99584 98 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 SAV1Q9H4B6 383 aaPredicted RBP16.17■□□□□ 0.18
LSM4-203ENST00000593829 CNTD2Q9H8S5 307 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 FBLN5Q9UBX5 448 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 TK1P04183 234 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 PPIAL4GP0DN37 164 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 TAS2R31P59538 309 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 CYCSP99999 105 aaKnown RBP16.17■□□□□ 0.18
LSM4-203ENST00000593829 SCGB2B2Q4G0G5 96 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 C8orf46Q8TAG6 207 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 NMES1Q9C002 83 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 METTL9Q9H1A3 318 aa16.17■□□□□ 0.18
LSM4-203ENST00000593829 K7N7A8 449 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 RAB27BO00194 218 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 CCSO14618 274 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 SH2D1BO14796 132 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 ZNF737O75373 536 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 PSMB6P28072 239 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 FGF12P61328 243 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 MOGAT2Q3SYC2 334 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 IL34Q6ZMJ4 242 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 SPAG16Q8N0X2 631 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 RNF141Q8WVD5 230 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 SEC22AQ96IW7 307 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 MLXQ9UH92 298 aa16.16■□□□□ 0.18
LSM4-203ENST00000593829 TRBV23-1A0A0A0MS06 115 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 ADCYAP1P18509 176 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 Q8NFD4 153 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 FAM46BQ96A09 425 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 POM121Q96HA1 1249 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 IL36GQ9NZH8 169 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 MBD2Q9UBB5 411 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 A0A0B4J2A0 478 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 TMEM235A6NFC5 223 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 GPR31O00270 319 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms