RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 CFHR3Q02985 330 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 SPHARQ15513 63 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 MMDQ15546 238 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 RBM48Q5RL73 367 aaKnown RBP12.59□□□□□ -0.39
CIRBP-240ENST00000592815 VAX1Q5SQQ9 334 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 C6orf141Q5SZD1 244 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 C6orf201Q7Z4U5 140 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 ODF3L1Q8IXM7 274 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 PHYHIPQ92561 330 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 KCTD7Q96MP8 289 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 YPEL2Q96QA6 119 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 MRPL20Q9BYC9 149 aaKnown RBP12.59□□□□□ -0.39
CIRBP-240ENST00000592815 VCXQ9H320 206 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 ABRACLQ9P1F3 81 aa12.59□□□□□ -0.39
CIRBP-240ENST00000592815 ANKRD65E5RJM6 399 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 IGF1P05019 195 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 ACTBP60709 375 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 DGCR2P98153 550 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 MED22Q15528 200 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 HSD17B12Q53GQ0 312 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 OR2AK2Q8NG84 335 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 KCNG3Q8TAE7 436 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 IL1F10Q8WWZ1 152 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 NABP2Q9BQ15 211 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 ZNF251Q9BRH9 671 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 TMEM59Q9BXS4 323 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 KCNK15Q9H427 330 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 SCN3BQ9NY72 215 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 ZMAT5Q9UDW3 170 aaKnown RBP12.58□□□□□ -0.4
CIRBP-240ENST00000592815 WSB1Q9Y6I7 421 aa12.58□□□□□ -0.4
CIRBP-240ENST00000592815 OR5H8P0DN80 308 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 CNTFRP26992 372 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 BLVRBP30043 206 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-240ENST00000592815 CD69Q07108 199 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 HMGN3Q15651 99 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 LY6G6FQ5SQ64 297 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 C11orf87Q6NUJ2 197 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 ZNF833PQ6ZTB9 187 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 OR5M8Q8NGP6 311 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 SETD6Q8TBK2 473 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 TMEM203Q969S6 136 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 NICN1Q9BSH3 213 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 CHMP1AQ9HD42 196 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-240ENST00000592815 STEAP1Q9UHE8 339 aa12.57□□□□□ -0.4
CIRBP-240ENST00000592815 LSM2Q9Y333 95 aaKnown RBP12.57□□□□□ -0.4
CIRBP-240ENST00000592815 G3V318 75 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 SLC22A1O15245 554 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 CD37P11049 281 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 PSMB8P28062 276 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 LUMP51884 338 aaPredicted RBP12.56□□□□□ -0.4
CIRBP-240ENST00000592815 UNC119Q13432 240 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 LIPKQ5VXJ0 399 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 TMEM65Q6PI78 240 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 C4orf3Q8WVX3 66 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 CHCHD6Q9BRQ6 235 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 TM2D1Q9BX74 207 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 ANKRD60Q9BZ19 345 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 KLK15Q9H2R5 256 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 OR51J1Q9H342 316 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 PLEKHJ1Q9NW61 149 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 NKX1-2Q9UD57 310 aaPredicted RBP12.56□□□□□ -0.4
CIRBP-240ENST00000592815 ZNF580Q9UK33 172 aa12.56□□□□□ -0.4
CIRBP-240ENST00000592815 SAA2-SAA4A0A096LPE2 208 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 TMEM14DPA8MWL7 114 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 NBR2O15453 112 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 ST8SIA5O15466 376 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 BPNT1O95861 308 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 NAPSAO96009 420 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 UCHL1P09936 223 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 SAA2P0DJI9 122 aaPredicted RBP12.55□□□□□ -0.4
CIRBP-240ENST00000592815 QRFPP83859 136 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 IRF3Q14653 427 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 C5orf64Q2M2E5 130 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 LIN54Q6MZP7 749 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 SVOPQ8N4V2 548 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 OR6M1Q8NGM8 313 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 IFI27L2Q9H2X8 130 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 PARP11Q9NR21 331 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 COL7A1Q02388 2944 aa12.55□□□□□ -0.4
CIRBP-240ENST00000592815 A0A0A6YYD4 124 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 IGHV7-81A0A0B4J1V7 117 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 SEC14L6B5MCN3 397 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 ATP6V0E1O15342 81 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 SOCS1O15524 211 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 RAMP3O60896 148 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 HLA-DRB1P01911 266 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 HSMCR30P0CW71 290 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 PPIFP30405 207 aaKnown RBP12.54□□□□□ -0.4
CIRBP-240ENST00000592815 DCTN2Q13561 401 aaKnown RBP12.54□□□□□ -0.4
CIRBP-240ENST00000592815 P2RY14Q15391 338 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 C9orf66Q5T8R8 295 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 ZNF880Q6PDB4 577 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 NPBQ8NG41 125 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 OR11H1Q8NG94 326 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 UFD1Q92890 307 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 B9D2Q9BPU9 175 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 PIPOXQ9P0Z9 390 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 KIAA1456Q9P272 454 aa12.54□□□□□ -0.4
CIRBP-240ENST00000592815 SLC23A1Q9UHI7 598 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms