RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 KLF17Q5JT82 389 aaPredicted RBP12.37□□□□□ -0.43
ATG4D-211ENST00000589753 VAX1Q5SQQ9 334 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 ZNF57Q68EA5 555 aaPredicted RBP12.37□□□□□ -0.43
ATG4D-211ENST00000589753 STEAP1BQ6NZ63 245 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 H1FOOQ8IZA3 346 aaPredicted RBP12.37□□□□□ -0.43
ATG4D-211ENST00000589753 C8orf31Q8N9H6 132 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 ZNF439Q8NDP4 499 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 OR2AK2Q8NG84 335 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 ZNF596Q8TC21 504 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 TINAGL1Q9GZM7 467 aaPredicted RBP12.37□□□□□ -0.43
ATG4D-211ENST00000589753 A0A1W2PRD5 423 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 A0A1W2PRF3 423 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 A0A1W2PRM7 423 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 ODF3BA8MYP8 253 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 ITGB1BP1O14713 200 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 RAB3DO95716 219 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 FSHBP01225 129 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 IFNA6P05013 189 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 HNF1AP20823 631 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 NFYAP23511 347 aaPredicted RBP12.36□□□□□ -0.43
ATG4D-211ENST00000589753 FCGR2CP31995 323 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 ZNF134P52741 427 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 KLF9Q13886 244 aaPredicted RBP12.36□□□□□ -0.43
ATG4D-211ENST00000589753 CT45A1Q5HYN5 189 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 ZNF626Q68DY1 528 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 SLC25A48Q6ZT89 311 aaKnown RBP12.36□□□□□ -0.43
ATG4D-211ENST00000589753 LINC00311Q8N616 119 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 BEND2Q8NDZ0 799 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 CT45A3Q8NHU0 189 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 EDARADDQ8WWZ3 215 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 ABHD14AQ9BUJ0 271 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 PARP12Q9H0J9 701 aaKnown RBP12.36□□□□□ -0.43
ATG4D-211ENST00000589753 ABCA1O95477 2261 aa12.36□□□□□ -0.43
ATG4D-211ENST00000589753 ZNF469Q96JG9 3925 aaPredicted RBP12.36□□□□□ -0.43
ATG4D-211ENST00000589753 NPFFO15130 113 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 SLC31A2O15432 143 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 IGLV1-47P01700 117 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 RAB7AP51149 207 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 LGALS4P56470 323 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 TSPAN5P62079 268 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 MEF2DQ14814 521 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 HLA-DRB5Q30154 266 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 DHRS11Q6UWP2 260 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 OR4D10Q8NGI6 311 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 OR4P4Q8NGL7 312 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 OR10X1Q8NGY0 326 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 GIMAP1Q8WWP7 306 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 DEDD2Q8WXF8 326 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
ATG4D-211ENST00000589753 MMP28Q9H239 520 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 NUP50Q9UKX7 468 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 OR2W1Q9Y3N9 320 aa12.35□□□□□ -0.43
ATG4D-211ENST00000589753 ST8SIA5O15466 376 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 TUSC2O75896 110 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 AMY2AP04746 511 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 AADACP22760 399 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 FAUP35544 74 aaKnown RBP12.34□□□□□ -0.43
ATG4D-211ENST00000589753 BPIFB3P59826 476 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 MIDNQ504T8 468 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 RUSC1-AS1Q66K80 236 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 FAAP20Q6NZ36 180 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 BRD3OSQ6XYD6 125 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 IL17RELQ6ZVW7 336 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 Q71RC1 249 aaPredicted RBP12.34□□□□□ -0.43
ATG4D-211ENST00000589753 TMEM17Q86X19 198 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 OR4C16Q8NGL9 310 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 OR6F1Q8NGZ6 308 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 ZNF2Q9BSG1 426 aaPredicted RBP12.34□□□□□ -0.43
ATG4D-211ENST00000589753 ABCB10Q9NRK6 738 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 ZNRD1Q9P1U0 126 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 AMMECR1Q9Y4X0 333 aaPredicted RBP12.34□□□□□ -0.43
ATG4D-211ENST00000589753 RBM7Q9Y580 266 aaKnown RBP12.34□□□□□ -0.43
ATG4D-211ENST00000589753 WNK2Q9Y3S1 2297 aa12.34□□□□□ -0.43
ATG4D-211ENST00000589753 DISC1C4P0D8 188 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 BUB1B-PAK6H3BSN5 160 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 UPK1BO75841 260 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 PPYP01298 95 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 OR8U9P0C7N5 309 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 HTR1DP28221 377 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 SAA4P35542 130 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 SRP14P37108 136 aaKnown RBP12.33□□□□□ -0.44
ATG4D-211ENST00000589753 LUMP51884 338 aaPredicted RBP12.33□□□□□ -0.44
ATG4D-211ENST00000589753 HERV-K104P61576 105 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 ZNF660Q6AZW8 331 aaPredicted RBP12.33□□□□□ -0.44
ATG4D-211ENST00000589753 LYG1Q8N1E2 194 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 OR8U1Q8NH10 309 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 OR56B4Q8NH76 319 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 FAM216AQ8WUB2 273 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 CREB3L1Q96BA8 519 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 SLC6A7Q99884 636 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 IFI27L2Q9H2X8 130 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 HRASLSQ9HDD0 168 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 MCUBQ9NWR8 336 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
ATG4D-211ENST00000589753 CELSR1Q9NYQ6 3014 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 ZANQ9Y493 2812 aa12.33□□□□□ -0.44
ATG4D-211ENST00000589753 LINC00854A0A1B0GVQ3 168 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 ZNF735P0CB33 412 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms